KEGG   Sorghum bicolor (sorghum): 8057857
Entry
8057857           CDS       T01086                                 
Name
(RefSeq) exopolygalacturonase
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi00040  Pentose and glucuronate interconversions
sbi01100  Metabolic pathways
Module
sbi_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    8057857
Enzymes [BR:sbi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     8057857
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix
Other DBs
NCBI-GeneID: 8057857
NCBI-ProteinID: XP_021321502
LinkDB
Position
7:61388073..61390052
AA seq 426 aa
MASIFVKSPVLYFVVVVVVLLCGGHAHGEGKAVTVYDVTEYGAAPSNRDNKDAFLAAWRA
ACDSTAGNATLHFPKGTFAVGAVEFEGPCRNGGAPAVVIDGVLQPCAGCRLSSDAWITFS
GLNNLLVTGDGGTLDGQGAGSDDDKVKSKSKTTTTTLVFDGVTNSTLRGLAFVNSRGFHV
NIRRSSRVVAEGLGIHAPAHSRNTDGVHVGLSSHIRVLDSVIGTGDDCVSVGPGSVDVVV
DGVICGPGHGLSVGSLGKEEGEEDVQGLIIKNCTVKGTTNGVRIKTWPGSPPSRASNITF
QDITMDGVANPIIIDQRYCPHDHCADANKPSEVQISDVTFERIEGTSSSRVAVRLLCSEE
RPCTGVRLDGINLSCGDQPCRSVLSNVRETPDSGSVVAPVPVPAPAPSPVSAPAARPPVE
AFAVAR
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggccagcatcttcgtcaagtccccggtgctctacttcgtcgtcgtcgtcgtcgtgctg
ctctgcggcggccacgcacacggcgagggcaaagcggtgaccgtctatgacgtgacagag
tacggagcggcgccgagcaacagggacaacaaagacgcgttcttggcggcgtggcgcgcg
gcgtgcgactccaccgccggcaacgcgacgctccatttccccaagggcacgttcgccgtc
ggcgccgtggagttcgagggcccgtgcaggaacggcggcgcgcccgcggtggtgatcgac
ggcgtgctgcagccgtgcgcggggtgccgcctctcgagcgatgcctggatcaccttcagc
ggcctgaacaacctcctggtcaccggcgacggcggcaccctcgacggccaaggcgccggc
agcgacgatgacaaggtcaagtccaagtccaagacgacgacgacgactctggttttcgac
ggcgtgaccaactccacgcttcgtggcctggcgttcgtcaacagccgggggttccacgtg
aacatccgccgcagcagccgggttgtagccgagggcctcggcatccacgcgccggcgcac
agccgcaacacggacggcgtccacgtcggcctgtcgagccacatccgcgtcctcgactcg
gtgatcggcaccggcgacgactgcgtctccgtcggccccggctccgtcgacgtcgtcgtc
gacggcgtcatctgcgggcccggccacggactcagcgtggggagcctggggaaggaggaa
ggcgaggaggacgtgcagggtctcatcatcaagaactgcacggtgaagggcaccaccaac
ggtgtgcgcatcaagacgtggcccgggtcgccgccgagccgcgcgtccaacatcacgttc
caggacatcaccatggacggcgtcgccaaccccatcatcatcgaccagcggtactgcccg
cacgaccactgcgccgacgccaacaagccgtcggaggtgcagatcagcgacgtgacgttc
gagcggatcgagggcacgtccagcagcagggtggcggtgcggctgctgtgcagcgaggaa
cggccgtgcaccggtgtgcgcctcgacggcatcaacctcagctgcggcgaccagccctgc
cgctcggtgttgtccaacgtgcgggagacgcccgactccggctcggtggtggcgccggtg
ccagtgccagcgccagcgccgagcccggtctctgctccggcggcgcgccctccggtggaa
gcgtttgccgtcgcaaggtag

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