Entry |
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Name |
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KO |
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Organism |
sbi Sorghum bicolor (sorghum)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:sbi00001]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
8057883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:sbi03019]
8057883
04131 Membrane trafficking [BR:sbi04131]
8057883
03029 Mitochondrial biogenesis [BR:sbi03029]
8057883
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:sbi04812]
8057883
Messenger RNA biogenesis [BR:sbi03019]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
8057883
mRNA cycle factors
P-body specific factors
8057883
Membrane trafficking [BR:sbi04131]
Others
Actin-binding proteins
Myosins
8057883
Mitochondrial biogenesis [BR:sbi03029]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
8057883
Cytoskeleton proteins [BR:sbi04812]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
8057883
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
10:8321655..8334895
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AA seq |
1529 aa
MGTKVNIIVGSHVWAEDPDTCWVDGEVVKINGEEAEIQATNGKKIVANLSKLYPKDMEAA
AGGVDDMTKLSYLHEPGVLENLAIRYELNEIYTYTGNILIAVNPFQRLPHLYDPHMMQQY
KGAPFGELSPHVFAVADVAYRAMINENKSNAILVSGESGAGKTETTKMLMRYLAYLGGRA
ATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLE
RSRVCQISDPERNYHCFYLLCAAPQEDVEKYKLGNRKTFHYLNQSNCYELVGVSDAHEYL
ATRRAMDIVGISTQEQDAIFRVVAAILHVGNIEFSKGKEVDSSVLKDEKSKFHLETTAEL
LMCNPGALEDALCKRVMVTPEEVIKRSLDPYNATISRDGLAKTIYSRLFDWLVDKINSSI
GQDASSKCLIGVLDIYGFESFKANSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTKEQID
WSYIEFVDNQDVLDLIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFQKHKRFVKPKL
SRTDFTICHYAGEVLYQSDQFLDKNKDYVVAEHQELLSASKCSFISGLFPPPPEETSKSS
KFSSIGARFKQQLQALMDTLNSTEPHYIRCVKPNNVLKPAIFENVNVMQQLRCGGVLEAI
RISCAGYPTRRTFYEFLHRFGILAPEALEGNSDEKVACKRILEKKGLLGFQIGKTKVFLR
AGQMAELDARRTEVLSAAAKTIQGKMRTHIMRKKFLSLRKASVCVQAIWRGRLACKLYDN
MRREAAAIKVQKNQRRHQARRSYKLHYASVLVVQTALRAMAARKEFRFKKQSTGAVTIQA
RYRCHRAHKYHKKLKWAAIVAQCRWRGRIARKELKKLKMEARETGALKEAKDKLEKKVEE
LTWRVQLEKRLRTDLEEAKAQELSKMQISMEALQAKLDEANTKLAKEREAAKTIEEAPPV
VKETQVIVQDTEKIDSLTTEVQELKTSLQLEKQRADDLEKKRSEEEQANEEKQKKLDETE
NKMRQFQDYLRRLEEKLANVESENKVLRQQAVSMAPSKILSGRSKSNLQRNSENVQVSSN
DPKITPESNNTSSPKKEYDIDDKPQKSLNEKQQENQDLLIRCIAQHLGYAGNRPVAACII
YKCLLHWRSFEVERTSVFDRIIQTVGHAIETQDNNEVLAYWLSNASTLLLLLQRTLKASG
STGMAPQRRRSSSATLFGRMTQSFRGAPQGVNLSLINGSMVTGVETLRQVEAKYPALLFK
QQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLMKGSSRSNTNTAAQQALIAH
WQGIVKSLGNFVNILKANNVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVK
AGLAELEHWCYRATDEYAGSAWDELKHIKQAIGFLVIHQKPKKTFDEISHDLCPVLSIQQ
LYRISTMYWDDKYGTHSVSPEVISNMRVLMTEDSNNPVSNSFLLDDDSSIPFSVDDISKS
MQQIDISDIEPPPLIRENSGFVFLLPPPE |
NT seq |
4590 nt +upstreamnt +downstreamnt
atggggaccaaagttaatataatcgtggggtctcatgtgtgggctgaagatcctgacact
tgttgggtcgatggagaggtggttaagatcaatggcgaagaggctgagatccaggcaacc
aatgggaaaaagattgttgcaaatttgtcgaaactgtatcccaaagatatggaagcagct
gctggcggagttgatgacatgacaaagctctcctatctccatgaaccgggagtgctggag
aatttagcgataagatatgagcttaatgaaatctatacatatactggcaatattctcatt
gctgtaaaccctttccaaaggctgccccatttatatgatccgcatatgatgcaacagtac
aagggtgctccatttggagagttaagtccacatgtttttgctgtggcagatgttgcgtac
agagctatgattaatgaaaataagagcaatgccattcttgtgagtggtgagagtggtgct
ggaaaaacagaaacaacaaaaatgcttatgcgatatcttgcctatttgggtggtcgggct
gcaactgaaggtaggacagtagagcaacaagttctcgagtcaaatccagttcttgaagct
tttggcaatgcaaaaactgtgagaaataataattctagtcggtttggtaagtttgttgag
attcagtttgataagcatgggaggatctctggtgctgctatcagaacttaccttctagaa
agatcacgtgtatgccaaatatctgacccagagcgcaactaccactgcttctatctcctt
tgtgcagcaccacaggaggatgtcgaaaagtacaaattaggaaatcgtaagacttttcac
tatctcaatcaatcaaattgctatgagttggttggggtaagtgatgcccatgaatactta
gctaccagaagagcaatggatattgttggtatcagtactcaggaacaggatgctattttt
agggttgttgctgctatccttcatgttggcaatattgaattttccaaggggaaagaagtt
gattcctctgtcttgaaagacgaaaaatctaagtttcatcttgagacaaccgctgagctt
cttatgtgtaatcctggagccttggaagatgctctttgcaagcgtgtcatggtaacacca
gaggaggttataaaaaggagccttgatccttacaatgcaaccattagcagggatggttta
gcaaagacgatatactctcgcttgtttgactggcttgttgacaaaattaatagttccatt
gggcaagatgctagttctaaatgtcttattggtgtgctggacatctatggttttgagagc
ttcaaggcgaacagttttgaacaattctgcattaactatacaaatgagaaattgcagcaa
catttcaatcagcacgttttcaagatggaacaagaggaatacactaaagaacaaattgat
tggagttatatcgagtttgtggataatcaagatgttcttgaccttatcgagaagaaacct
ggtggtgttattgcacttcttgatgaggcatgtatgtttcccaagtcaacacacgagaca
tttgcccagaagttgtaccagacttttcaaaagcacaaacgatttgtaaagccaaagtta
tctcgtaccgattttacaatttgtcactatgctggagaggtgttgtatcagtctgatcaa
ttccttgacaaaaataaagactatgttgtggcagagcaccaggaactgctaagtgcttct
aaatgctcatttatctctggattatttccacctccaccagaggagacatctaaatcttcc
aagttctcttccattggagctcgctttaagcaacaacttcaagcccttatggatacatta
aactctacagagcctcactatatcagatgcgtgaagccaaataatgttctaaaaccagcg
atttttgagaatgtcaatgtcatgcaacagttgcgatgtggtggtgtacttgaggctatc
aggatcagttgtgctgggtatccgacacgtcgcacattttatgagtttttgcatcgtttt
ggaatacttgcacctgaggcccttgaagggaatagcgatgaaaaagttgcatgcaagagg
attttggaaaaaaagggcctattaggctttcagataggtaaaacaaaagtttttctgaga
gccggccagatggctgaactagatgctaggaggactgaagtactcagtgctgcggcaaaa
acaattcaggggaaaatgcggacacatatcatgcgaaagaagttcctttctttgaggaag
gcctctgtatgtgttcaggccatatggagaggaagattggcttgtaaactgtatgataac
atgcgaagggaagcagctgccatcaaagttcagaaaaaccaacgtaggcatcaggcaaga
agatcctacaagctccactatgcttctgttcttgtagtgcaaactgcattgcgagcaatg
gcagcacgaaaggagttcagatttaagaagcaatctacgggagcagttacaattcaggct
cgttataggtgccatagggctcataagtaccataagaagttgaaatgggcagccattgtt
gcacaatgcagatggaggggaagaattgcaaggaaagaactaaagaaactcaaaatggaa
gcaagagaaacaggtgcactcaaggaagcaaaggataaactcgaaaagaaagtggaagaa
cttacatggcgcgtgcagttagagaaacgactaaggacagacttggaagaagcaaaagca
caggagttgtcaaaaatgcagatttctatggaagcattacaagctaaactggatgaggca
aacacaaagcttgccaaggagcgagaagctgccaagactattgaagaagcgcctcctgta
gtgaaggaaactcaggtcatcgtccaagacaccgaaaagattgattccttaacaacagaa
gttcaagaacttaagacttcattacaattagaaaaacaaagagctgatgatttagaaaag
aaacgttctgaagaggaacaagcaaatgaagaaaagcaaaagaaactggatgagactgaa
aacaaaatgcgtcaatttcaggactacctaagaaggttagaagagaaactcgctaatgta
gaatctgaaaataaagtgcttcgtcagcaagctgtctcaatggctccaagcaaaattctt
tctggccgctccaagtccaatttacaaagaaactctgaaaatgttcaagtatcaagcaat
gatccaaaaataactccagaatccaataatacgtcctcacctaaaaaggaatacgatatt
gatgataagccacagaagtcacttaacgaaaagcaacaggagaatcaagatctattaatt
aggtgcatcgcacaacatttaggctatgctgggaataggccagttgctgcttgtattata
tacaaatgccttcttcattggagatcatttgaagtagaacggacaagtgtttttgatcgc
atcattcaaaccgttggacatgcaattgagacacaagacaacaatgaagtcctagcatac
tggctttcaaatgcttcgacgctattgctattgcttcaacggacattaaaggctagtgga
tcaactggtatggctccacagcgtcgacggtcatcttctgctacactttttggacgaatg
acgcagagcttcagaggagcgccacaaggtgtaaatctttctctcataaatggaagcatg
gttactggcgttgaaactctgagacaagtcgaagccaagtatcctgctttactgtttaaa
cagcagcttacagcatatgtggagaagatatatggaatgatccgggataatttgaagaaa
gagatatctcccttgcttggcttgtgcattcaggccccgagaacatcaagggcaagctta
atgaaagggtcttcacgttcaaacactaataccgctgcccaacaagctttgattgctcac
tggcaggggattgtgaagagcctaggaaattttgtgaacatactgaaagcgaacaatgtt
cctcctttcttggtgcgaaaagtattcactcaaatattctcatttatcaatgtacaacta
tttaacagtttactactgagaagggagtgttgttcattcagtaatggcgagtatgtaaaa
gcaggattagctgaacttgaacattggtgctatagggctactgatgagtatgcaggttca
gcctgggatgagcttaaacatattaaacaagctattggtttcctggtaattcatcaaaag
ccaaagaaaacattcgatgaaataagtcatgacctttgtccggtacttagtatacaacaa
ctatacaggattagtactatgtactgggatgacaagtatggaacgcatagtgtctcccca
gaggtaatatcaaacatgagagtattaatgacagaagactccaacaatcctgtaagcaat
tcattcctcctggatgatgactcgagcataccattctctgtggatgacatatccaaatca
atgcagcagattgacatatctgacattgagccgcctccattgatccgagagaactctggt
tttgtattcttgttgccgccgcctgaatag |