Sorghum bicolor (sorghum): 8058004
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Entry
8058004 CDS
T01086
Name
(RefSeq) peroxisome biogenesis protein 1
KO
K13338
peroxin-1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8058004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8058004
Membrane trafficking [BR:
sbi04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
8058004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
ATPase_2
AAA_14
AAA_22
AAA_5
DUF815
ORC-CDC6-like
Bac_DnaA
RuvB_N
nSTAND3
RNA_helicase
TsaE
AAA_19
AAA_7
IstB_IS21
AAA_28
RNA12
Mg_chelatase
AAA_33
bpMoxR
DNA_Packaging_2
AAA_11
Rad17
Motif
Other DBs
NCBI-GeneID:
8058004
NCBI-ProteinID:
XP_002445705
UniProt:
C5YNA6
LinkDB
All DBs
Position
7:complement(60742068..60750468)
Genome browser
AA seq
1094 aa
AA seq
DB search
MSGGGMEVEVRVVGGARSCFAALPLHLIHALERTSATGDLPPVLALELRGPAGARWSLAW
SGAASRSRAIEVAQELAECISLPDRTTAQLSVARSLAKADSVSIEPYSEDDWEILESRAD
LAEETILKQVGIVYEGMKFPLWLDGHNIVKFVVVSSFPEKTVVQLVPGTEVAVAPKKRKE
KPSQDLQKQSALNEPVKTKALLRVQAADRKYAHTFKYKGVEIGVVVSYAVLIHPDTAASI
SVGNLQLVTVSPKSSKKGLAPKGKEVGQKKGIPVTKERAHEAIVYILLSDSVAKGHVMLP
YSIRHFISADVHSWVYIKTYSANIKEDEPLVTISPLQFKMRVKDAHGSSKLVSQEADTSR
ITRIPSENGDFFQKARYSESENLQGADIESISESVSKQKFFIKHWLIGHLKEMGLHASHT
EMNSIVLPTNILLHLEVTDKEGIKGVEFLYLLALTSENSSFNNSQLNVETVWSVPTGNSD
DLELHFGKLELGEPVSFDSLVDSGSSDGFKLTRSSLGWMENAMSDVTKRLSVLLSATSLR
LFNRIKFPFPGHVLVYGPRGSGKTALTRASAKYFEDHKDILAHIVYIDCSKLALGKAKET
RQEIEDRISEALLHSPSIIIFDDLDSVISVSSDPQVSQSSSSSDSLVRYLTDIMDEYKDK
IRNTCGYGPMAFMASVQSLQSLPQDLTSSGRFDFHIELPALAVAERKALLQHQVEEHELL
CSEEVLSEIASKCEGYDAYDLEILVDRAVHAAAYRFLLPSNASHNSLKQTLLMEDFSEAM
HGFLPVAMRDLRKYAPDDKDGGWEDVGGLNEAVTIIKETLELPSKYPNIFTKAPVRLRSN
ILLYGPPGCGKTHIVRAAAAACSLRFISVKGPELLNKYIGSSEQSVRDFFAKAVAAAPCL
LFFDEFDSIAPQRGTHSAGVSDRVVNQFLTELDGVETLTGVFVFAATSKPQLIDAALLRP
GRFDRLVFCDFPRWDERLEILKVHSRTVSLASDASLEDVASLTEGFTGADLAAILTDAGL
AAVHELLDNQENGVPESEPCISKELLMSVTRKARPSTPADEKRRYDREFGEFVSSRKSIS
TKARESKGKKVTLA
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcgggatggaggtggaggttcgcgtggtgggcggcgcccggagctgcttc
gccgcgctcccgctccacctcatccacgccctggagcgcacctccgccaccggcgacctc
ccgcccgtcctcgcgctcgaacttcgcggccccgccggcgcgcgctggtccctcgcctgg
tccggcgccgcgtcccgatcccgcgccatcgaggttgcacaagagttagcagaatgcatc
tcgctgcctgacagaactacagcacagttgagcgtagctcgctctctggccaaagctgac
tcggtcagtattgaaccctacagtgaggatgactgggagatactggagagccgtgctgat
ttggctgaagaaacaatcttgaagcaggtcggcatcgtttatgagggcatgaaatttcca
ttgtggttggatggacataatattgtgaagttcgttgttgtgtcatcttttcccgagaag
acagttgttcaacttgtaccaggcactgaagttgctgttgcacccaaaaaacgaaaagag
aagccttctcaggatctgcaaaagcaaagtgcactgaatgaaccagtcaaaacaaaggca
ctcctgcgtgttcaagcagctgataggaagtatgcacatacattcaaatataaaggtgtt
gagataggtgtggttgtcagctatgctgtgctaattcatcctgatacagctgcaagtatt
tcggttggcaatctccaattagtcactgtttcacctaaatcatcaaagaaaggactagct
ccaaaaggcaaagaagttggacaaaaaaagggaattccagtaactaaagaaagggcccat
gaagccattgtttatatcttactttcagactctgttgcaaaagggcatgttatgcttccc
tactctattcgtcacttcataagtgctgatgtacattcatgggtatatattaagacatat
tctgccaacatcaaggaggatgaacctctagtgacaatatctcctttacagttcaagatg
cgtgtgaaagatgcccatggtagcagtaaattagtcagtcaagaagcagacacttcgagg
ataaccaggattccttcagaaaatggtgatttcttccagaaagctcgttacagtgaaagt
gaaaatcttcaaggtgcagatattgagagcatttctgaatcagtgtcaaagcagaaattt
tttattaagcattggcttattggacaccttaaagaaatgggcttgcatgctagccatacc
gagatgaattcaatagttttgccaaccaatattttgcttcatttagaagtgacagataaa
gaaggaatcaaaggagttgaatttttatacctactagcacttacttcggaaaattctagt
ttcaacaattcacaacttaatgttgagactgtttggagtgttccaaccggcaattccgat
gatcttgaactgcatttcgggaagttggagctgggtgagcctgtatcttttgattcccta
gtggacagtggttccagtgatggtttcaagctgacccgatcttctttaggttggatggag
aatgcaatgtcagatgtgacaaaaaggttatctgtgctcttatcagcaactagcctaagg
ttatttaataggataaagttcccctttcctggacatgttcttgtctatggacctcgaggt
tctggcaaaaccgctttgaccagggcttctgcaaaatactttgaagaccataaagatatc
ttggcacacatagtatacatagattgttccaaacttgcacttggcaaggctaaggagaca
aggcaagagattgaagacagaatatctgaagcactgcttcattcaccttcgatcatcata
tttgacgatctggacagtgtaatttcagtctcttcagatcctcaagtgtctcaatcgtcc
agttcttctgattctcttgtgagatatttaactgacattatggatgagtacaaggataag
attcgaaatacatgcgggtatggacctatggcatttatggcttcggttcaatcacttcag
agtcttcctcaagacttaacctcttctgggagatttgatttccatattgagcttcctgct
cttgcagtcgctgagcgcaaagccctattgcaacatcaagttgaggagcatgagttactg
tgttctgaggaagttctatcagagatagcatcaaaatgtgaaggttatgatgcatatgac
ttggaaattttggttgatagggctgtgcatgctgctgcttatcgctttcttctgccttct
aatgcttctcacaactctctgaaacaaactttgctgatggaagatttctctgaagcaatg
catggcttccttccagtcgccatgcgtgatcttaggaaatatgctcctgatgataaagat
ggtggttgggaggatgttggagggctaaatgaagcagtaactatcattaaagagactctt
gaactgccatcaaaatacccaaatatctttaccaaggcacctgtgcggttgcggtcgaac
attctcctgtatggaccacctggatgtggtaaaactcacattgtgagagctgcagctgct
gcttgttctttgcgattcatttcagtcaagggtccagagctattgaataagtatattggt
tcatctgagcaatctgttcgcgacttttttgcaaaggccgttgcagcagcaccttgccta
ttattctttgatgaatttgactccattgcaccccagcgaggaacccatagtgctggagtt
tctgatcgtgtagttaatcagtttttgacggaactcgatggtgtggagaccttgactgga
gtatttgtatttgcagctacgagcaagccacagctaattgatgctgcgcttttgcggcct
ggaaggtttgatcgtctagtcttttgtgatttccctcggtgggatgaacgtttagaaatt
ctgaaggtgcattctaggacggtttcactggcaagtgatgccagtctcgaagatgttgct
tctctaactgaaggatttactggtgctgatctcgctgctattctaacggatgctggacta
gcagcagttcatgaacttttggacaaccaggagaatggtgtcccagaaagtgaaccgtgc
atcagcaaagaacttctcatgtctgtcactaggaaggctcgaccttccacaccagcagat
gagaagaggcgatacgatagggagtttggtgaattcgtgtcatccaggaagtctatttcg
acgaaggcaagagagtcgaaaggcaaaaaggtcacactagcttga
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integrated database retrieval system
