Sorghum bicolor (sorghum): 8058142
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Entry
8058142 CDS
T01086
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8058142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8058142
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8058142
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
8058142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-RING_UBOX
zf-C3HC4_3
zf-RING_10
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
8058142
NCBI-ProteinID:
XP_002442006
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All DBs
Position
8:11302417..11306161
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AA seq
326 aa
AA seq
DB search
MAKFSFDDASEDPPAFSSEGEKRKREDGPAEAAAGGGSSKARISAVEGEEQDGSAVVGAE
RAEGTGRNLETVVGGEADGISVRIDPDVLDCSICFEPLQPPLYQCQNGHVVCFSCWSRLT
NKCHICSHDANFVRNIALEKVVESVKSYCSYAKWGCNKLVSYACRNAHEESCLYAPSVCP
IPGCEYRGFTGWWSGHFLTNHNNDGLCFSYGQCFEVSLEMSVPFLVLLAEDDHLFIFINK
NVIPFGHALSVCCLRNGNLNGNFFYEMRATSNGNTENSLQLKASVTNTREWQGLSPTEAF
LLVPYAFIKSSKLTLNVSIERVAHGM
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttctcctttgacgacgccagcgaagaccctcccgccttctcttccgagggc
gaaaagagaaagcgcgaggacggcccagccgaagcggcggccggcggaggatcctcgaag
gcccgaatttcggcggtcgagggcgaagagcaggatggaagcgcggtggtaggggcggag
agggctgaagggaccggccgtaatctggagacggtcgttggcggagaggctgacgggatt
agtgtgcgcatcgacccggatgtgcttgattgctccatctgcttcgagcccctccaaccg
cccctctatcagtgccaaaatggccatgtagtgtgcttttcctgctggtctaggctcacc
aacaaatgccacatttgttctcatgatgctaactttgtacgaaacattgcactggagaag
gttgttgagtcagttaaatcatactgctcatatgccaaatggggctgtaacaagttggtc
agctatgcgtgcagaaatgctcacgaagaatcctgcctttacgctccttcagtgtgtcct
attcctggttgtgagtacagaggattcactggatggtggtcaggacatttccttacaaac
cataataatgatgggctgtgcttctcatatggtcagtgtttcgaagtgagtttggaaatg
tcagttccttttctggttcttctagcagaggatgatcacctattcattttcatcaacaag
aacgtgattccctttggccatgcgctttcagtgtgttgccttaggaatggcaatctgaat
gggaatttcttctatgaaatgagagcaactagtaatggaaacactgaaaacagtctgcaa
ttgaaggcttctgtcacaaatacaagggagtggcaaggtctcagccctacagaagctttc
cttttggttccatatgccttcatcaaatctagcaaacttacactaaatgtctctattgag
agggttgctcatgggatgtga
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