KEGG   Sorghum bicolor (sorghum): 8058208
Entry
8058208           CDS       T01086                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    8058208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8058208
   03036 Chromosome and associated proteins [BR:sbi03036]
    8058208
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     8058208
Chromosome and associated proteins [BR:sbi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    8058208
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 8058208
NCBI-ProteinID: XP_002456021
UniProt: C5XEI1 A0A921RGM1
LinkDB
Position
3:57125760..57136859
AA seq 344 aa
MATFGTAGASAANQNPNKSVEVTPAPGDSVSSLSFSPKANHLVSTSWDNQVLCWEVMAGG
ACQAKASISHDQPVLCSAWKDDGMTVFSGGCDKQVKMWPLLSGGQPTVFSGHEAPIKELA
WVPQMNLLVSGSWDKTLRYWDIRQPQPVHVQQLPDRCYALSLSYPLMVVGTADRNVVVFN
LQNPQAEFKRITSPLKLQTRCLAAFPDQQGFLIGSIEGRVGVHHVDDSQQGKNFTFKCHR
DGNDIYSVNSLNFHPVHGTFATTGSDGGFNFWDKDSKQRLKAFNKCPAPITCSTFNHDGS
IFAYAVCYDWSKGAEKHNPSAAKTNIFLHSVQESDVKGKPRGKK
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggcgaccttcggtaccgccggcgccagcgccgccaaccagaaccccaacaaatccgtc
gaggtgactccggcgcccggggactcggtgtccagcctcagcttcagccccaaggcgaac
cacctcgtttcaacctcatgggacaaccaggttctgtgctgggaggtcatggctggtggg
gcatgccaagcgaaggcctccatttcgcacgatcaaccggtgctgtgctcggcttggaag
gatgatgggatgactgttttctcaggaggctgtgataagcaggttaaaatgtggcctctg
ctctcaggtggccagcccacggttttctcagggcatgaggcacctattaaagagctcgct
tgggtgccacagatgaatcttcttgtcagtgggagctgggacaagactttgaggtactgg
gacattaggcaaccccaaccagtgcatgttcagcaacttcctgaccgctgctatgctcta
tcgctttcttatcctctcatggtggttggcactgctgatcgcaacgtagtagtcttcaat
ctgcagaatccacaggctgaattcaagaggattacatcacctttgaagctccagacaagg
tgtcttgctgcatttcctgatcaacaaggttttttgattgggtcgatagaaggacgagtt
ggtgttcatcacgtggatgactctcagcaaggaaaaaacttcacattcaagtgtcaccgt
gatggcaatgatatatactctgttaactcattgaacttccatcctgtgcatggtacattc
gctactacaggctctgatggaggtttcaacttttgggacaaggacagtaagcaaaggctg
aaggcttttaataagtgtccagcacccatcacatgcagtacattcaatcatgatggctct
atatttgcttatgcggtatgctatgattggagcaagggtgctgagaagcataatccttct
gctgcaaagacaaatatctttctacatagtgtacaggaatctgatgtgaaaggaaagcct
cgtggaaagaagtag

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