KEGG   Sorghum bicolor (sorghum): 8058259
Entry
8058259           CDS       T01086                                 
Name
(RefSeq) long chain acyl-CoA synthetase 4
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi00061  Fatty acid biosynthesis
sbi00071  Fatty acid degradation
sbi01100  Metabolic pathways
sbi01212  Fatty acid metabolism
sbi04146  Peroxisome
Module
sbi_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    8058259
   00071 Fatty acid degradation
    8058259
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    8058259
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:sbi01004]
    8058259
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sbi04147]
    8058259
Enzymes [BR:sbi01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     8058259
Lipid biosynthesis proteins [BR:sbi01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   8058259
Exosome [BR:sbi04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   8058259
  Exosomal proteins of breast cancer cells
   8058259
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-GeneID: 8058259
NCBI-ProteinID: XP_002456072
UniProt: C5XFA1
LinkDB
Position
3:58133651..58141032
AA seq 655 aa
MQNVVEVEPGRPAADGRPSVGPTYRSAYARDGFPPPVPGMDCCYDIFRMAVEKYPNNRML
GHREIVDGKAGAYVWKTYNEVFDIANKIGNSIRSCGLAKGSRCGIYGANCPEWIITMEAC
NAHGIYCVPLYDTLGAGAIEFILCHAEVEIAFAEEKKIELLVKTLPKSNEFLKTIVSFGK
VTQEQKEEVRKYGLSVYSWDEFLSLAADQEFDLPVKEKSDICTIMYTSGTTGDPKGVLIS
NASIICLIAGVDRLLSSQNEELAESDVYMSYLPLAHIFDRVVEELFIFHGASIGFWRGDV
KLLVEDIGVLKPTIMCAVPRVLDRIFSGLQAKISSGGFLKSTLFNVAYKFKHFRMMRGAK
HNEAASICDKVVFSKVKEGLGGNVRVILSGAAPLATHVEEYLRVVTCAHVLQGYGLTETC
AGSFVSLPNQMSMIGTVGPPVPNIDVRLESVPEMDYDALASTPRGEICIRGETLFSGYYK
REDLTKEVLIDGWFHTGDIGEWQPDGCMKIIDRKKNIFKLSQGEYVAVENLENVYGLVSA
SDSIWVYGNSFESFLVAVVNPNKEALESWAAANGISGDFESLCKNPKAKEYILGELSRIG
KEKKLKGFEFIKDVHLEPVPFDMDRDLITPTYKKKRPQLLKYYQGVIDNMYKSAK
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgcagaacgtggtggaggtcgagccgggccgcccggctgccgatggccggccgtccgtg
gggcccacctaccggagcgcctacgcccgcgacggattcccgccgcccgtccccgggatg
gactgctgctacgacatcttccgcatggccgtggagaagtatccaaacaacagaatgctt
ggccaccgcgagattgttgatgggaaggctggtgcatatgtctggaagacatataacgag
gtatttgacattgcaaacaaaattggtaactctattaggagctgcggacttgcaaagggt
agtcgttgtggtatctatggtgctaactgtcctgaatggattatcacaatggaggcttgc
aacgcccatggaatctactgtgttccattatacgacacacttggagctggtgcgatagag
tttattctgtgccatgcagaagttgagattgcttttgctgaggaaaagaaaattgagctg
ctcgtgaagactttacccaagtcaaatgagttcttaaaaacgatcgtgagttttggcaag
gtaactcaagaacagaaggaagaagttcgcaaatatgggctatcagtgtactcatgggat
gaatttctgtccctggcggctgaccaagaatttgatcttccagtcaaggagaagtcagat
atatgcactataatgtatactagtggaactactggtgacccgaaaggagtattgatatca
aatgcgagcattatttgtctcattgcaggtgtggacaggttacttagctctcaaaacgag
gagttggcagaaagcgacgtttacatgtcttaccttcctcttgcacacatttttgatcgt
gttgtggaggaattgtttattttccatggtgcctctattggattctggcgaggggatgtt
aagctgctagttgaagatattggtgtgctgaaaccaacaattatgtgtgctgttcctcgg
gttcttgatcggatattttctggactacaagctaaaatatcctctggtgggtttttaaag
agtacactgtttaatgttgcttacaaattcaagcattttagaatgatgagaggagctaag
cacaatgaagctgcttccatatgtgacaaagtagtttttagtaaggtgaaagagggtctt
ggtggaaacgttagagttattttatctggagctgctccacttgctacccatgttgaagaa
tacttgcgagtggtgacatgtgcacatgtcttacaaggatatggtctcacggaaacttgt
gctggatcttttgtctcgctaccaaatcaaatgtccatgataggaactgttggcccccca
gtgccaaacatcgatgttcgtctggagtcggtcccagaaatggattacgatgcactggcg
agcacgcctcgtggagagatatgcatcaggggagaaacattattctcaggatactacaag
cgcgaagaccttacaaaggaggtcctgattgatggatggttccacactggtgacattggt
gagtggcaacctgatggatgtatgaaaatcatcgatcgcaaaaagaatatattcaaactt
tcgcagggtgaatatgtggcggttgaaaatttggagaatgtttacggccttgtttctgct
tcagactcgatatgggtatatgggaacagctttgagtccttccttgttgctgtggtcaat
cccaacaaggaggctcttgagagttgggctgcagcaaatggaataagtggtgattttgag
tccttgtgcaagaatccaaaagcaaaagaatacattttaggagaactgtcaagaatagga
aaagaaaagaagctcaaaggttttgaattcataaaagatgtgcacctggaaccagtacca
tttgacatggaccgtgatttgatcactccgacatacaaaaagaagcgtccacaactgctc
aagtactaccagggcgtgattgacaacatgtacaaaagtgctaagtga

DBGET integrated database retrieval system