Sorghum bicolor (sorghum): 8058290
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Entry
8058290 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8058290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8058290
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8058290
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
8058290
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
8058290
NCBI-ProteinID:
XP_002440840
UniProt:
C5YV87
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All DBs
Position
9:complement(14990611..14997327)
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AA seq
353 aa
AA seq
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MDMDSVECLSLPDAAMDVDDVDGHPHHGHHGHLGLPLHPAHLPSSGAGRAFPKVNAGGGG
AGPAGAGAAGAAGAAGAGGGPPATSVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARV
HNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNC
PYAGSECAVAGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFG
QYFCLHFEAFQLAMAPVYMAFLRFMGDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSH
RKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQTNPDGACIPNLCS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacatggacagcgtggagtgcctctccctcccagacgctgccatggacgtggacgac
gtcgacggccacccgcaccacggccaccacggccatctcggcctcccgctccaccccgcc
cacctcccatcctcgggcgccggccgcgcgttccccaaggtgaatgccgggggcggcggg
gcgggaccggcgggagcgggtgcggcgggggcagcgggcgcagcgggagcaggcgggggg
ccaccggcgaccagcgttcacgagctgctcgagtgccccgtctgcaccaactccatgttc
ccgcccatccatcagtgtcaaaatggacatactttgtgttcgacatgcaaggccagggtg
cacaaccggtgccctacatgcagacaagagcttggtgatatcaggtgcttagcattggaa
aaggtagcagagtcacttgagcttccctgtaagtactgctctttaggttgcccagagatc
ttcccatactacagcaagataaagcatgaagcgcagtgcagcttcaggccatataactgc
ccctacgctggctctgaatgtgctgtggctggtgatattccattccttgttgcacatttg
agggatgatcacaaagttgacatgcacagtggctgcacattcaaccatagatacgtcaaa
tccaacccgcgcgaggttgaaaatgccacctggatgctaacagtattccattgttttggg
cagtacttctgcctgcactttgaggcattccagctcgcaatggctccagtgtatatggct
ttcctccgattcatgggtgatgagaatgaagcaaggaactatacatatagcctagaggtt
ggtggtaatgggaggaaaatggtatgggaaggtactcctagaagcatccgtgacagccac
cgcaaggtccgtgacagccatgatggcctcatcatccagaggaatatggcgctgttcttc
tcaggcggtgacaggaaggagctgaagctgagggtgactgggcggatctggaaagagcag
accaacccggatggagcctgcattcctaacctttgcagctga
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