Sorghum bicolor (sorghum): 8058299
Help
Entry
8058299 CDS
T01086
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 isoform X1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00541
Biosynthesis of various nucleotide sugars
sbi01100
Metabolic pathways
sbi01250
Biosynthesis of nucleotide sugars
Module
sbi_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
8058299
Enzymes [BR:
sbi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
8058299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-GeneID:
8058299
NCBI-ProteinID:
XP_002440852
UniProt:
C5YVA8
LinkDB
All DBs
Position
9:complement(15461117..15467439)
Genome browser
AA seq
686 aa
AA seq
DB search
MLGVRFLLRQQDSKSNHTGDMARPYKPKNILITGAAGFIASHVAIRVTKKYPDYKIVVLD
KLDYCSNLKNLLPVSSSPNFKFVKGDIASADLVNFLLVTEKIDTIMHFAAQTHVDNSFGN
SFEFTKNNIYGTHVLLEACRITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPY
AATKAGAEMLVMAYGRSYGLPVITSRGNNVFGPNQFPEKLIPKFILLAMRGEPLPIHGDG
GNVRSYIYCEDVAEAFEVILHHGEVGHVYNIGTKRERTVIDVAKDVCKLFSLEAGKVIMF
VENRPFNDQRYFLDDEKLKSLGWAERTPWEEGLKKTMEWYVANSDYWGDVSGALLPHPRT
LMMPGYEGSEEIKGILSQFNNIQTKVTSTLDTALETHAFKFLVYGRTGWIGGLLGKICEK
KGIPYEYGKGRLQERSSLNLDIQTIKPTHVFNAAGVTGRPNVDWCESHKPDTIRTNVVGT
LNLADVCREHGLLMMNYATGCIFEYDADHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEEL
LREYENVCTLRVRMPISSDLNNPRNFVTKISRYNKVVNIPNSMTMLDELLPISVEMAKRN
LRGIYNFTNPGVVSHNEILEMYKQYIDPSFKWTNFTLEEQAKVIVAPRSNNEMDATKLKK
EFPELLSIKDSLIKFVFEPNRKVPIN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcttggtgttcgcttccttcttcgacaacaggattctaaaagcaatcatacaggggac
atggcgaggccttacaagcctaagaatatcctcattacaggagctgctggctttatcgca
tcccatgtcgcgatccgtgttaccaagaagtaccccgattacaagatcgttgtccttgac
aaacttgactactgctctaatctgaagaacctgctccctgtgagctcgtcaccaaacttc
aagtttgtcaagggagatattgcaagcgctgatcttgtcaacttccttcttgtcacggag
aaaattgacaccataatgcacttcgcagcccagacacatgttgacaattcatttgggaat
tctttcgaatttaccaagaacaatatttatggtacacatgttcttcttgaggcctgcagg
attactggtcagatcaagaggttcatccatgtcagcactgatgaggtctatggggagact
gatgaggatgcagttgttgggaaccatgaagcatcacagctgcttcccacaaacccatat
gcagccaccaaagcgggagcagagatgcttgtcatggcatatgggagatcctatggactt
ccggttatcacctctcgaggaaacaatgtctttggccccaatcagtttcctgagaagctt
atcccaaagtttattcttttggcaatgagaggggagccactccctatccatggtgatgga
ggcaatgtccgtagctacatctattgtgaggatgttgcggaggcatttgaggtcatccta
catcatggagaagttggacatgtgtataatattggaacaaagagagagaggacagtaatt
gatgtagcaaaagatgtttgtaagcttttcagtcttgaagctggcaaagtcatcatgttt
gtcgagaacagacctttcaatgaccagaggtatttcttggacgatgagaagctcaagagc
cttggatgggctgagcgcaccccatgggaggaaggcttaaaaaagacaatggaatggtat
gtagcaaattctgattattggggtgatgtttctggggccttactgcctcatccaaggaca
ttgatgatgccagggtacgagggctctgaagagattaaaggaattctcagtcagttcaat
aacattcaaacaaaggtcacttcaacattggatactgctctagaaacgcatgccttcaag
ttcctggtatatggcaggacaggatggatcggtggacttcttggaaaaatatgtgagaag
aaaggaattccatatgagtatggaaaaggccgcttgcaagaacgttcttcactcaacctg
gatatccaaactattaagccaacacatgtcttcaatgccgctggtgttactggaaggccc
aatgttgactggtgtgagtcacacaaaccagacaccattcgtaccaatgttgtgggcacc
ttaaatctagcagacgtatgtagggagcatggcttattgatgatgaactacgcgactggg
tgcatatttgagtatgatgcagatcatcctgaagggtcaggtattggtttcaaagaggaa
gatacaccaaattttacaggttcattctactcgaagacgaaggcaatggtcgaggagcta
ttgagggagtatgagaatgtctgcactctgcgagttcgaatgccaatatcctctgacctc
aacaacccccgaaactttgtgacaaagatcagccgttacaacaaggtggtgaacatcccc
aacagcatgacgatgttggacgagctcctgcctatctcagtggagatggcaaagaggaac
ctgcggggcatctataacttcaccaaccctggtgttgtcagccacaacgagatcctagag
atgtacaagcagtacatcgaccctagcttcaagtggacaaacttcacccttgaggagcag
gccaaggttattgtcgcgccacgaagcaataatgagatggatgcaaccaagctgaagaaa
gagttccccgaactgctatcgatcaaagactcgttgatcaagtttgtctttgagcccaat
aggaaggtgcctataaactga
DBGET
integrated database retrieval system
