Sorghum bicolor (sorghum): 8058450
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Entry
8058450 CDS
T01086
Name
(RefSeq) chloride channel protein CLC-a
KO
K05016
chloride channel 7
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
8058450
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
8058450
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8058450
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbi04040
]
8058450
Protein phosphatases and associated proteins [BR:
sbi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
8058450
Membrane trafficking [BR:
sbi04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
8058450
Ion channels [BR:
sbi04040
]
Chloride channels
Chloride channel (CLC)
8058450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
8058450
NCBI-ProteinID:
XP_002438781
UniProt:
C5Z779
LinkDB
All DBs
Position
10:complement(55745763..55749095)
Genome browser
AA seq
801 aa
AA seq
DB search
MEEEQSPRLGREPATEPSPSLEWPEPECKNDDGVKDPEDPESTGGGGDGNGISSLEQPLL
KRSTTLTASHLAIVGAKVSHIESLDYEIIENDLFKHDWRSRSNVEVLQYIFLKWAMAFLV
GLLTGVIASLINLAIENISGLKMQHMVNLVREKRYWAGFLYFAGVNFALTFVAAVLCVVF
APTAAGPGIPEIKAYLNGVDTPNMFGAPQLIVKIIGSIGAVSSGMDLGKEGPLVHIGACL
ANLLSQGGEGRWRLRWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFALEEVAT
WWRSALLWRTFFSTATVVVVLRGFIEVCRDGRCGMFGEGGLILFDVSDVTVRYHVGDLLP
VTLVGVLGGVLGALYNHVLHQVLRLYNLINAKGRMAKLALALAVSVFTSAGLYLLPFAVP
CSPCDPAFGDACPTVGKSGNFKQFNCPDGYYNDLASLLHATNTDATRNIFSTGTAGEFRL
DSLLIFFAIYCVLGLFTFGIAVPSGLFLPIILMGSAYGRMVALVLARFVRIDHGLYAVLG
AAALMSGSMRMTVSLCVIFLELTNNLLLLPITMFVLLIAKTVGDAFNPSIYEIILDLKGL
PFLEPKPETWMKDLAVGELAAAKPRVVTLQVIEKVSTVVEVLRSTPHNGFPVLDRPRPGV
SELHGLVLRSHLMAVLKKRWFLTEKRRTEEWEARERFSSTELAEKSGSIDEVAVQLTPEE
LDMYIDLHPFTNTTPYTVVETMSVAKAVVLFRTCALRHMLIIPKFQGPEIAPIVGILTRQ
DLRAHNILGAFPHLANKRKVH
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagcagagcccgaggcttggccgggagccggcgaccgagcccagtccttcg
ctggaatggccggagccggaatgtaagaacgacgacggtgtgaaagacccagaagacccg
gagagcaccggcggcggcggtgacggcaacggcatcagctccctggagcagccgctgctc
aagcggagcaccaccctgacggccagccacctcgccatcgtcggcgccaaggtctcccac
atcgagagcctcgactacgagatcatcgagaacgatctgttcaagcacgactggcgcagc
cggtccaacgtggaggtgctgcagtacatcttcctcaagtgggccatggcgttcctcgtc
ggcctcctcaccggcgtcatcgcgtccctcatcaacctcgccatcgagaacatctccggc
ctcaagatgcaacacatggtcaacctcgtccgcgagaagcgctactgggcgggcttcctc
tacttcgccggcgtcaacttcgcgctcaccttcgtcgccgccgtgctctgcgtcgtcttc
gcccccaccgccgccggccccggcatccccgagatcaaggcttatctcaacggcgtcgac
acgcccaacatgttcggcgcgccgcagctcatcgtcaagatcattggcagcatcggcgcc
gtgtcgtcgggaatggatctcggcaaggagggcccgctggtgcacatcggcgcgtgcctg
gccaacctgctcagccagggcggcgagggccgctggcggctgcgctggcggtggctgcgc
tacttcaacaacgaccgggaccgccgggacctgatcacgtgcggcgcgtcgtccggggtg
tgcgcggcgtttcgcgcgcccgtcggcggcgtgctgttcgcgctggaggaggtggcgacg
tggtggcggagcgcgctgctgtggcgcaccttcttcagcacggccaccgtcgtggtggtg
ctgcgcggcttcatcgaggtgtgcagggacgggcgctgcggcatgttcggcgagggcggg
ctcatcctcttcgacgtcagcgatgtcaccgtccgctaccacgtcggcgacctcctcccc
gtcacgctcgtcggcgtcctcggcggcgtcctcggggcgctctacaaccacgtcctccac
caggtgctccggctgtacaacctgatcaatgccaagggacggatggcgaagctggcgctc
gccctcgcggtgtccgtgttcacgtcggcggggctgtacctcctgccgttcgccgtgccg
tgctcgccgtgcgacccggcgttcggcgacgcgtgcccgacggtgggcaagtccggcaac
ttcaagcagttcaactgccccgacggctactacaacgacctcgcgtcgctgctccacgcc
accaacacggacgccacgcgcaacatcttctccacgggcaccgccggcgagttcaggctc
gactcgctgctcatcttcttcgccatctactgcgtgctggggctcttcaccttcggcatc
gccgtgccgtcgggcctcttcctgcccatcatcctcatgggctccgcctacggccgcatg
gtcgcgctcgtgctcgcgcgcttcgtgcggatcgaccacggcctctacgccgtgctcggc
gccgccgcgctcatgtcgggctccatgaggatgaccgtctcgctctgcgtcatcttcctc
gagctcaccaacaacctcctcctgctccccatcaccatgttcgtgctgctcatcgccaag
acggtcggtgacgccttcaaccccagcatctacgagatcatcctcgacctcaagggcctg
ccgttcctggagcccaagccggagacgtggatgaaggacctggccgtcggcgagctcgcg
gccgccaagccgcgggtcgttacgctgcaggtcatcgagaaggtgtccaccgtcgtcgag
gtgctcaggtccacgccgcacaacggcttccccgtgctggaccggccacggccaggcgtg
tcggagctccacgggctggtgctccggtcccacctcatggcagtgctcaagaagcggtgg
ttcctgacggagaagaggaggacggaggaatgggaggcccgtgagaggttctcgtcgacg
gagctcgcggagaagtccgggagcatcgacgaggtggcggtgcagttgacgccggaggag
ctggacatgtacattgacctccacccgttcaccaacaccacgccgtacaccgtcgtagag
accatgtcggtggccaaggccgtggtgctcttccgaacctgcgcgctccggcacatgctc
atcatcccaaagttccaaggccctgagatagctccaattgttgggattctaacaaggcag
gacctcagggcacacaacatccttggtgcatttcctcatctggcaaacaaaaggaaagta
cactaa
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