Sorghum bicolor (sorghum): 8058475
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Entry
8058475 CDS
T01086
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8058475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8058475
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
8058475
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Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
F-box-like
LRR_8
LRR_14
Motif
Other DBs
NCBI-GeneID:
8058475
NCBI-ProteinID:
XP_002439826
UniProt:
C5YY77
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All DBs
Position
9:50075557..50080104
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AA seq
369 aa
AA seq
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MVSGRPGNGELDAWFKSLMVTSSSERGQAGSGGPAPTLSGWKDLPMELLVRIISTVGDDR
IVIVASGVCTGWRDALGWGVTNLSLTWCKQSMNNLMISLAHKFTKLQVLTLRQNKPQLED
SAVESVANYCHDLRELDLSRSFRLSDRSLYALAHGCPRLTRLNISGCSNFSDTALIYLTC
HCKHLKCLNLCGCGKAATDRALQAIAQNCGQLQSLNLGWCDDVTDKGVTSLASGCPDLRA
VDLCGCVLITDESVVALANGCPHLRSLGLYFCQNITDRAMYSLANSRVKSKCGRWDAVKD
GLANLNISQCTALTPPAVQAVCDSFPALHTCPERHSLIISGCLSLTSVHCACALHPHRAA
RALMANHAY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcgggaggcccgggaatggtgaattggatgcatggttcaagagcctcatggtg
acctctagcagcgagagggggcaggctggaagtggtggcccagcgccaacattatcagga
tggaaagaccttccgatggagctcctggtcaggataatatcgactgttggagatgatagg
atagtcattgtggcatctggtgtttgcacaggctggcgtgacgctctgggatggggggtc
actaatctttcccttacatggtgcaaacagagcatgaataatttaatgatatctcttgca
cacaagtttacaaagttgcaagttctcactcttcggcaaaacaaacctcagcttgaagac
agtgctgtagagtctgttgccaattactgtcatgatctgcgtgagttagacctcagcaga
agcttcagacttagtgaccgctccttgtatgcattggcccatggatgcccgcggcttaca
agactgaacattagtggatgttccaatttcagtgatactgccttgatttaccttacctgc
cactgtaaacacctgaagtgcctgaacttgtgtggatgtgggaaggctgctactgacaga
gctttgcaggctattgctcagaactgtgggcagctgcaatctttgaacctaggctggtgt
gatgatgttacagataagggtgtgaccagcttagcgtcaggatgtcctgatctcagagct
gtagacttgtgtggttgtgttcttataacagatgagagtgtggttgctcttgccaacgga
tgtccgcacctgcgctcgttgggcctctacttctgccagaacatcacggaccgtgccatg
tactccctcgcaaacagccgcgtgaagagcaagtgtgggaggtgggatgcagtgaaagac
gggcttgcgaacctcaacatcagccagtgcaccgccctgacgcccccagcggtgcaggcc
gtctgcgactcgttcccggcgctgcacacctgccccgagaggcactccctcatcatcagt
ggctgcctcagcctcacgtcagtccactgcgcctgcgccctccacccacaccgtgccgcg
agagcgctgatggccaaccatgcgtactaa
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