Sorghum bicolor (sorghum): 8058574
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Entry
8058574 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8058574
KO
K17302
coatomer subunit beta'
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8058574
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8058574
Membrane trafficking [BR:
sbi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
8058574
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
8058574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_HPS5
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
CPSF_A
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
8058574
NCBI-ProteinID:
XP_002450314
LinkDB
All DBs
Position
5:complement(4128725..4136338)
Genome browser
AA seq
506 aa
AA seq
DB search
MGTPLQLRASPPPSSPPPPPSSASPETLAPTLGSVSKLVSEVESMAVSVAPSSSQLITSG
PMETSTEISSIKSTESSKPLDVHPLELRFPWRPNRRIRCPVTITNRTDHYIGVCIKPCCP
DTTTTLDLHSLAFWDDKRQKDPCSPIFRLVEPHSTLVVTMMVEEKQLPPPPQEIGMYQVM
LLEMRSEEVLENMKSSNGSNFNIASEFVKGVRMGNDWHLTFLRASICDPSSCQEAVIHQL
IPETLKDGYMTYIDVHPTETWILVGDTKGWVSIWNYQTKERVMVLKVTKVHTNDACWVYS
AKFIAREQWFITGDDNGWIHVYSYTTKDKMTEFEAHHGTFLDTMAVHPTEPLLLTSTPNV
TSIKLWNWSKEWMCIRTFDVPNKQVFRLLWNPRDSNTFTSVSLDRKVKVWNIDSSYPITT
LPVESSSATYLSFGSNGNLMATACYRKAFVEGSECAWIWNLHAEKRVHKLGVWGDNHFVA
CHPTLPILVTSLGYYVVCIWDTRTYR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaccgctgcagctccgagcttcgcctccaccctcttcacctccgcctccaccg
tcttctgcgtcgccggaaaccctagctccgacacttggttctgtctccaagttagtcagt
gaggtagagtcaatggctgtttctgtagcaccatcctcgtcgcagctaataaccagcgga
ccaatggagacaagcactgagataagctccatcaagtcaactgagagtagcaagccacta
gatgtccacccgctggagctccgttttccttggcggccaaacaggcgtatcagatgccct
gtgaccataaccaacaggacagaccattacattggtgtctgtattaaaccctgctgccct
gatactacaaccaccctcgacctccattctctagctttctgggatgacaagcgtcagaag
gacccatgttcacccatttttcggttggtggaaccgcattccactttggtcgtgacaatg
atggtggaagagaaacaactaccaccacctccgcaagaaatagggatgtatcaggtgatg
ttgctcgaaatgagatcagaggaagtactagaaaatatgaaatcgtccaatggtagcaat
tttaacatcgccagtgagtttgtgaagggagtaaggatggggaacgattggcaccttaca
tttcttagggcttccatttgcgacccatcaagttgccaagaggcagtaatccaccagttg
attccagaaacactgaaagatgggtacatgacatacatagatgtacaccccacagagaca
tggatcttggtgggtgacacaaaaggatgggtttctatttggaactaccagacaaaggaa
agagtaatggtcttgaaggtcaccaaagtacataccaatgatgcgtgttgggtttattcc
gctaaatttattgctagggagcaatggtttataactggggatgacaacggatggatccat
gtctactcctacactacaaaggacaagatgacggaattcgaagcacaccatggaacattt
cttgatacaatggctgttcacccaacagagccattattgctcacatcaactcctaatgtc
acctcgatcaagctttggaactggagtaaggagtggatgtgcatccgaacatttgatgtg
cccaacaagcaggtgttccgtctcttgtggaacccaagagacagcaacacctttactagt
gtttcattggatagaaaagttaaggtctggaatattgattcttcatatcctatcaccaca
ttaccagtggagtccagcagtgctacctatctttcctttggtagtaatgggaacctcatg
gctactgcttgttatcggaaggccttcgtagaaggttctgagtgtgcatggatatggaat
ttgcatgcggagaaacgtgttcacaaacttggtgtgtggggggacaaccattttgttgct
tgccacccaacgcttccaatactggtcacctcattagggtactatgttgtttgcatatgg
gatactaggacgtacaggtaa
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