Sorghum bicolor (sorghum): 8058662
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Entry
8058662 CDS
T01086
Name
(RefSeq) chitinase-3-like protein 1
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00520
Amino sugar and nucleotide sugar metabolism
sbi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
8058662
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
8058662
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
8058662
NCBI-ProteinID:
XP_002447644
UniProt:
A0A921QP61
C5YE78
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Position
6:complement(30800753..30802785)
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AA seq
467 aa
AA seq
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MRATLRLAIAVAMAVVVSQSLAATAPAPRDARETPPASTTVRAGFYLAADARLRHLDRLD
PSLYTHLYYSALAVHPTTHKLVLPTDPAQAGLLATFSPTLKSKNRALETLLSVGTAGIGA
GADSQTDPAFAAMAADPASRAAFVAEAVALARDSGFDGLDVAWRFPASAVEMANFGFLVS
EWRAAAPPGFLLTATVYFSNHVFDAPLPGVDYPSEAVARCLDWVNVVAFGLHPLAAGATN
ATAFDAPLYDRASHFSASYGVVSWIDAGVPASKVVMGLPLYACSWFLRNKANSGVGAPVV
AAGPKQHGSNATGIMSYAEVQKIAAAGGGSHRAVTTTFDNASVASYLSMGDVWVAFDGAA
VVAEKLAFAARRGLLGYFLWPVNYDDANLTVSRSALDVWMKNEISSNSKNDTGVRQTQGP
VRLPPALQSPAGTPGPGPAPTSGSRSWLPWTKLDAFLHFGGLILVCF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagggccaccctccgcctcgccattgccgtggccatggccgtggtggtctcccaatcg
cttgctgcgacggctcctgcgccgcgtgacgcccgagaaacgccaccggcgtcgacgacg
gtgcgcgccggattctacctcgccgccgacgcccgtctccggcatctcgataggctcgac
ccctccctctacacgcacctctactactccgcgctggccgtgcaccccaccacccacaag
ctcgtgctccccacggacccggcccaggcgggcctcctcgccaccttctcccccacgctc
aagtccaagaaccgggcgctcgagaccctgctctctgtcggcaccgccggcattggcgca
ggtgcggattcgcagaccgacccagcgttcgccgccatggccgcggacccggcgtcccgc
gcggcgttcgttgccgaggccgtcgcgctggcccgggacagcggcttcgacgggctcgac
gtcgcgtggcggttcccggcatctgccgtggagatggccaacttcgggttcctcgtttcc
gagtggcgcgccgccgcgccgccggggttcctgctcaccgccacggtctacttctccaac
cacgtctttgacgcgccgctcccgggcgtggactacccgtccgaggccgtggcgagatgc
ctcgactgggtcaatgtcgtggcgttcggtctccacccgctcgccgcgggtgcgaccaac
gcgacggccttcgacgcgccgctctatgaccgggcgtcccacttctcggcgagctacggc
gtcgtgtcttggatcgacgccggcgtgcccgcgagcaaggttgtcatgggcctcccgctc
tacgcctgctcgtggttcctacgcaacaaggcaaacagcggcgtcggggcgccggtggtc
gccgcggggccgaagcagcacgggagcaacgccaccggcattatgtcctacgccgaggtc
cagaaaatcgccgctgccggcgggggcagccaccgcgcggtcaccacgacgttcgacaac
gcgtccgtagcgtcctacctgtccatgggtgacgtctgggtcgccttcgacggtgcggca
gtcgtggccgagaagctcgccttcgcagcgcggcgtgggctcctcggctacttcctatgg
ccggtgaactacgacgacgccaacctcaccgtctcaagaagtgcattggatgtctggatg
aagaacgagatttcgtcgaattcgaagaatgacaccggcgtcaggcagacacaggggccg
gttcggttgccgccggctctccagtcccctgcaggaacgccaggaccagggccggcgccg
acgtctgggtcgcgctcatggctgccttggacgaagcttgacgcgttcctgcattttggg
gggttaattcttgtgtgcttttag
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