Sorghum bicolor (sorghum): 8058923
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Entry
8058923 CDS
T01086
Name
(RefSeq) coronatine-insensitive protein homolog 1a
KO
K13463
coronatine-insensitive protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8058923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8058923
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
8058923
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box_5
Transp_inhibit
F-box-like
LRR_At5g56370
LRR_4
F-box
Motif
Other DBs
NCBI-GeneID:
8058923
NCBI-ProteinID:
XP_002456649
UniProt:
C5XPW1
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All DBs
Position
3:67693655..67697268
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AA seq
596 aa
AA seq
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MGGELPEPSRLRRALSFGCGAVPEEALHLVFGYVDDPRDREAASLVCRRWHRIDALSRKH
VTVGFCYAVEPARLLARFPRLESLALKGRPRAAMYGLIPEDFGAYAAPWVAQLAAPLDCL
KALHLRRMTVTDEDIAVLVRARGYMLQVLKLDKCSGFSTDALRLVARSCRSLRTLFLEEC
TIADEGSEWLHELAVNNSVLVTLNFYMTDLRVEPADLELLAKNCKSLISLKMSECDLSDL
IGFLQTSKGLQEFAGGAFSEVGEYTKYEKVKFPPRLCFLGGLTFMSKNEMQVIFPYSAML
KKLDLQYTCLTTEDHCQLIAKCPNLLVLEVRNVIGDRGLEVVGDTCKKLRRLRIERGDDD
PGQEEQGGVSQIGLTAVAVGCRELEYIAAYVSDITNGALESIGTFCKNLYDFRLVLLDKQ
NKIADLPLDNGVRALLRNCTKLRRFAFYLRPGGLSDVGLGYIGLYSGNIQYMLLGNVGES
DNGLIQFAMGCTNLRKLELRSCCFSERALAVAVLQMPLLRYIWVQGYRASQTGQDLMLMA
RPYWNIEFVPPGPESAYRVMADGQPCVDTHAQVLAYYSLAGRRPDCPQWLVTLHPA
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgagctgccggagccgagccggctgagacgcgcgctcagcttcggctgcggc
gccgtccccgaggaggcgctgcacctcgtgttcggctacgtggacgacccgcgcgaccgg
gaggcggcctcgctcgtgtgccgccgctggcaccgcatcgacgcgctctcgcgcaagcac
gtcaccgtcggcttctgctacgccgtggagcccgcgcggctgctcgccaggttccccagg
ctcgagtcgctcgcgctcaaggggaggccccgcgccgccatgtacggcctcatccccgag
gacttcggcgcctacgccgcgccctgggtcgcccagctcgccgcgccgctcgactgcctc
aaggcgctccacctgcgccgcatgaccgtcaccgacgaggacatcgccgtgctcgtccgc
gcgcgcggctacatgctacaggtgctcaagctcgacaagtgctccggcttctcaaccgac
gccctccgcctcgtcgcccgctcctgcagatctctgagaactttgttcctggaagaatgt
acaattgccgatgaagggagtgaatggctccatgaactcgctgtcaacaattctgttctg
gtgacactgaacttctacatgacagatctcagagtggagcctgctgatctggaacttctt
gcaaagaactgtaaatcattgatttctttgaagatgagtgagtgtgatctttcagatctg
attggttttctccaaacctccaaaggattgcaagaattcgctggaggtgcattttctgaa
gttggagagtacaccaaatacgaaaaggtcaagttcccacctagactatgcttcttgggg
ggtcttaccttcatgagtaaaaatgagatgcaagttatctttccatattctgcaatgctt
aagaaactggacttgcagtacacttgcctcaccactgaagatcactgtcagcttattgct
aaatgccccaacctactggttctcgaggtgaggaatgtgattggggatagaggactagaa
gttgttggtgatacatgcaagaagctacgaagactcagaattgagcggggggatgatgat
cccggtcaagaagagcagggaggagtctctcagataggtttgacagccgtagctgttggc
tgccgtgaactggagtacatagctgcctatgtatctgatatcacaaatggggcgctggaa
tccattggcacgttctgcaagaatctctatgacttccggcttgttctgcttgacaaacag
aacaaaatagcagatctgccacttgacaacggcgtccgtgctctattgaggaattgcaca
aaacttcggaggtttgccttctacctgagaccgggagggctttcagatgtaggccttggt
tacattggactgtacagtggaaacatccaatacatgctgctcggcaacgttggcgaatct
gacaatggattgatccaatttgcaatgggatgcaccaacctgcggaagctcgagctgagg
agctgctgcttcagcgagcgagctctggcagtggccgtgctccagatgcccttgctgagg
tacatatgggtgcaggggtacagagcctctcaaacaggtcaggacctcatgctcatggcc
aggccatactggaacattgaatttgtgcctcccggtcccgagagcgcctatcgtgtgatg
gcagatggacagccttgtgttgacacccatgcccaggttcttgcgtattactcccttgct
ggaaggaggccggactgtcctcagtggttggttactttgcatcctgcgtga
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