Sorghum bicolor (sorghum): 8058943
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Entry
8058943 CDS
T01086
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
8058943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8058943
03036 Chromosome and associated proteins [BR:
sbi03036
]
8058943
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
8058943
Coactivators
SAGA/TFTC/STAGA complex
8058943
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
8058943
STAGA complex
8058943
TFTC complex
8058943
SAGA complex
8058943
SLIK complex
8058943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
8058943
NCBI-ProteinID:
XP_002458799
UniProt:
C5XQH8
LinkDB
All DBs
Position
3:complement(68028998..68033899)
Genome browser
AA seq
498 aa
AA seq
DB search
MDAPPPSQPDAAAAPPSSTTASAPSPAPPSNPPTSTAAAAAPASDSAITTSNPNPATAAN
PTQTLEAPGPVPAAARPPPPRMRPPYTHLAAPITMSSSSSGAATAAASSASVPAASSAAP
PVPRGGVVLGVPAPRPAQTPAGYTGFVPPPPLAHQFGLMHRGPDQPPPSSSQFRQPSPGI
QNIGMAGSINTSQMRPGAISGPQQPRPGLPSSTTTIPSGSQMPGSQRAPSQSLMRPMTVS
SPSPLPASQQTPQSSSSTFRPQQRPQISQPRPQQSAPVTPPQQNIILTQQQQQQQQQHQK
QQQQSSSHQNQQSTAPKNQPQLSQQPAARTPISMTPKPDSPAVPNVAVLQSVDAAATDAN
GSETGARLITKRSIHELVAQIDPNEKLDPEVEDVLIDIAEDFVESVTTFACSLAKHRKSS
TLEAKDVLLHAERSWNITLPGFSGDEIKLYKKQHINDIHRERLALIKKSMATDTRISAAQ
AAANQKNQTPKPPAPASP
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcctccgccctcgcagccggacgccgcggcggcgccgccctcctcgaccacg
gcttctgctccctctccggcgccaccatccaacccacccacttctaccgccgccgccgca
gcacccgcgtccgattccgccatcaccacatctaacccgaacccagctaccgccgcaaac
cccactcaaaccctagaggctccaggccccgtccccgcggccgcgcggccgccgccgccg
cgaatgaggccgccttacacccacctggccgcgcccatcacgatgtcgtcgtcctcctct
ggggctgccacagccgcggcctcctcggcttccgtcccggccgcttcctccgcggctcct
cctgtgccacgcggtggggttgttctgggggtgcctgcgccgcgtcccgcacagacgccc
gctggttacactgggttcgttccgccgcctccgcttgctcaccagtttggattgatgcat
cgcggtcctgaccagcccccgccttcatcttcgcagtttaggcaaccttcccctgggatt
cagaatattgggatggctggatccattaacacatcccagatgaggccaggagcaatatct
ggtccgcagcagcccagacctggacttccatcatcaacaactactatcccatctggtagc
caaatgccaggttcacaaagagccccctctcagtctttaatgaggccgatgactgtgagt
tctccttctcctttgccggcttcacagcaaactccacaaagttcatcttcaacatttagg
ccccaacagaggccacaaatttcgcaaccaagaccacaacaatctgcacctgtgactcca
cctcaacagaacataattttaacacagcagcagcagcagcagcagcagcagcatcagaag
caacaacaacagagttcctcacatcaaaatcaacaaagtactgccccaaaaaatcagcca
caactttctcagcagccagccgctcgtactccaatatcaatgacaccaaagcctgattca
ccagctgtaccaaatgttgctgttttacaatctgtggatgcagctgcaactgatgcaaat
ggtagtgaaactggtgctcgactaatcaccaagagaagcatacatgaattagttgcacag
attgatcctaatgaaaaactggatcctgaagttgaagatgttcttattgacatcgcggaa
gattttgttgagtctgtcacaacatttgcttgttctttagcaaagcataggaagtcaagc
acattagaagcaaaagatgtacttctccatgcagagagaagctggaatatcaccttgcca
ggcttcagtggtgatgaaatcaaactatacaagaaacagcacataaatgatattcacagg
gagaggcttgctctgatcaagaagtccatggcgactgacacaagaatctctgctgcccaa
gcagcagctaaccagaaaaaccagactccgaaaccacctgccccagcttccccgtga
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