Sorghum bicolor (sorghum): 8059051
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Entry
8059051 CDS
T01086
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
8059051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8059051
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
8059051
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
Motif
Other DBs
NCBI-GeneID:
8059051
NCBI-ProteinID:
XP_002453634
UniProt:
C5XZG8
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Position
4:complement(11752803..11757116)
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AA seq
398 aa
AA seq
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MADGLCELLVDDHCELRHRLSGAEDLFSIIGTTWKEGTNRAGGDGAGGCSSGAMRAYSQS
SPAGAVGARPSVNCRKRTGDEEKGSGGGGAPVQKKHKGSAVTDDAAADEGEAKMSHITVE
RNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLETKKHRKAYAE
QVLSPRPAGGSVSAASPRPLAAVVKSTPPLSPRVAVPISPRTPTPGSPYKPAAAASGAAG
TAGSCRLPYPPAAAAYMAAASPAITPTSSSSSYSLDQQQQQQHYSMQTTTTTYLPTLDSL
VTELAAQAACRPAAAGLNLPDVKVEFAGPNLVLKTVSHRSPGQALKIIAALESLSLEILH
VSVSTVDDTMVHSFTIKIGIECELSAEELVQEIQQTLL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcctgtgcgagctcctggtcgacgaccactgcgagctccggcaccgcctg
tcgggcgctgaggacctcttcagcatcatcgggactacgtggaaggagggcacgaaccgc
gccggcggtgatggtgctggaggctgttcttctggggctatgcgggcatatagccagagc
tcccctgctggcgccgtgggggctaggccgtctgtgaactgccggaagcgcacgggcgac
gaggagaaaggcagcggcggcggcggcgctcccgtgcagaagaagcacaagggttcagcg
gtgacagatgatgcagccgctgacgagggggaggcgaagatgtcacacatcacggtggag
cgcaaccggaggaagcagatgaacgagcacctcaccgtgctacgctcgctcatgccctgc
ttctacgtcaagaggggagaccaagcgtccatcataggaggggtggtggactacatcaag
gagcttcagcaggtgctgcgttcgctggagaccaagaagcaccgcaaggcatacgcggag
caggtgctgagccctcggcctgcaggtggtagcgtgtcggcagccagcccgcggcctctc
gccgccgtcgtcaagtccacgccgccgctcagcccgcgtgtcgcggtgcccataagcccc
cggacgccgaccccgggcagcccgtacaagcctgctgctgctgcatccggcgcggctgga
acagctggaagctgcaggctcccatacccgcctgccgctgccgcctacatggcggcggcg
tcaccggcgataacgccaacgtcgtcgtcgtcgtcctactcgctcgatcagcagcagcag
cagcagcactactccatgcagacgacgacgacgacgtacctgccgaccctagacagcctc
gtaaccgagctcgccgcgcaggcagcctgcaggccagcggcggccggcctcaacctcccc
gacgtgaaggtggagtttgctgggcccaacctggtgctcaagacggtgtctcaccggtcg
ccggggcaggcgctcaaaatcatcgccgcactcgagtctctgtcgctggagatccttcac
gtcagcgtcagcaccgtggacgacaccatggtgcactccttcaccatcaagattgggatc
gagtgcgagcttagcgcggaggagcttgtgcaggaaattcaacaaacgttattgtga
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