Sorghum bicolor (sorghum): 8059248
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Entry
8059248 CDS
T01086
Name
(RefSeq) protein EXPORTIN 1A isoform X1
KO
K14290
exportin-1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03008
Ribosome biogenesis in eukaryotes
sbi03013
Nucleocytoplasmic transport
sbi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8059248
03008 Ribosome biogenesis in eukaryotes
8059248
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
8059248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8059248
03009 Ribosome biogenesis [BR:
sbi03009
]
8059248
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8059248
03036 Chromosome and associated proteins [BR:
sbi03036
]
8059248
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
8059248
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
8059248
Pre-60S particles
8059248
Transfer RNA biogenesis [BR:
sbi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
8059248
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
8059248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
IBN_N
CRM1_repeat
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
8059248
NCBI-ProteinID:
XP_002463478
UniProt:
C5WRW8
A0A921UWM1
LinkDB
All DBs
Position
1:380326..390680
Genome browser
AA seq
1071 aa
AA seq
DB search
MAEKLRDLSQPIDVTLLDATVAAFYGTGSKEERSAADQILRDLQNNPDMWLQVVHILQNS
QNLNTKFFALQVLESVIKYRWNALPVEQRDGIKNYISDVIVQLSSNEVTFRQERLYVNKL
NIILVQVLKHEWPSRWSSFIPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEMTQQK
IKELKSSLNSEFRLIHELCLYVLSATQRPELIRATLATLHAFLSWIPVGFIFESPLLETL
LKFFPMAAYRNLTLQCLTEVAALQFGDFYNVQYVKMYTFFMIQLQAILPPEKIPDAYANG
STEEQAFIQNLALFFTSFFKNHMRILEITQENAAALLMGLEYLIGISYVDDTEVFKVCLD
YWNVFVLELFEAHNQMEPAATVSMMGLQAQMVPGMVDGTGTAVQQRRQLYSGPLSKLRML
MICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEQQMLKK
LSKQLNGEDWSWNNLNTLCWAIGSISGSMVEEQENRFLVMVIRDLLNLCEITKGKDNKAV
IASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHEMHPGVQDMACDTFLKIVQKCKRKF
VTQQVGENEPFVSELLSNLATTIADLEPHQIHTFYESVGHMIQAESDNTKRDEYLKRLMS
LPNQKWAEIIGQASQSIDILKNQDVIRSVLNILQTNTSVASSLGPHFFPQISLIFLDMLT
VYRMYSELVSSTIAEGGPFASRTSFVKLLRSVKRETLKLIETFVDKAEDLPHIGKQFVPP
MMDPVLGDYARNVPDARESEVLSLFATIINKYKGEMLEDVPRIFEAVFQCTLEMITKNFE
DYPEHRLKFFSLLRAIGTHCFQALIQLSSPQLKLVIDSINWAFRHTERNIAETGLSLLLE
ILKNFQASGFQNQFYKTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCVVDGLTEPL
WDASSVPYQYTDNAMFVRDYTIKLLGTSFPNMTVTEVTKFVDGLLSSKHDLPSFKNHIRD
FLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLAIPGLIAPSELQDEMVDS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagctcagggatctgagccagccgatagacgtgacgctcctcgacgccacg
gtcgccgccttctacggcaccggatctaaggaggagaggagcgccgctgatcagatacta
cgtgatctacaaaataacccagacatgtggctacaagttgtgcacattctgcagaattcc
cagaatctcaacaccaagttctttgcactgcaagtacttgaaagtgttatcaagtacagg
tggaatgcattgcctgttgaacaacgtgatggcataaagaattacatatccgatgttatt
gtgcagctttccagcaatgaagttacctttcgtcaggagaggctttacgtcaataaactc
aatattattttggtgcaggtcctgaaacatgagtggccttctagatggtcatccttcata
cctgatcttgttgcagctgcaaagagtagtgaaactatatgtgaaaattgcatggctata
ttgaagcttctaagcgaagaaatttttgacttctcaagaggtgaaatgacacaacaaaag
atcaaagaactgaagtcttcacttaatagtgaattccggctcattcatgagctatgtttg
tatgtcctatctgcaacgcaaaggccagagctcatccgtgctacattggcgacactccat
gctttcttatcatggatccccgttggattcatcttcgagtcaccattgctggagacatta
ctgaagttcttccctatggctgcttatcggaatcttacacttcaatgcctgacagaggtc
gcagctcttcaatttggtgatttttataatgtgcagtatgtgaagatgtatacatttttc
atgattcagttgcaggctattctccctcctgaaaaaatcccagacgcatatgctaatggt
tccactgaagagcaggcgtttatacaaaatctcgcactcttcttcacatccttctttaag
aatcacatgcgtatactggaaataactcaagaaaatgctgctgctttgcttatgggtctc
gagtaccttattggaatttcatatgttgatgatacagaggtttttaaggtctgcttggat
tactggaatgtgtttgtcttagagttatttgaagcacacaaccaaatggaacctgcagca
actgtaagcatgatggggcttcaggcacagatggttcctggaatggtagatgggaccggc
actgctgttcaacagaggagacagctttactctggtccactctcaaaactacggatgctg
atgatttgtcgaatggcaaagcctgaggaagtacttattgttgaagacgaaaatggcaat
attgtacgtgagacaatgaaggacaacgatgttcttgttcagtacaagatcatgagggaa
acattgatctatttatctcatcttgatcatgaggatacagagcaacagatgttgaagaaa
ctaagcaagcaattaaatggagaagactggagttggaataatcttaatactctctgttgg
gccattggatcaatatcaggctctatggtagaggagcaggagaatagatttctggttatg
gttatccgtgatttgctaaacctctgtgaaatcacaaagggaaaagacaataaagctgtg
attgcaagtaacatcatgtatgttgttggtcagtatccaagatttctcagagctcattgg
aagtttttgaaaaccgtggtcaacaaattgtttgagttcatgcatgagatgcatcctgga
gttcaggatatggcatgtgataccttcttgaaaattgttcaaaaatgcaagcgcaaattt
gtgacgcaacaggtgggcgagaatgaaccatttgtttctgaacttctgtccaaccttgct
acaacaattgctgatcttgagccacatcagattcacacgttttacgaatcagttggccat
atgattcaagctgaatctgacaacactaagagggatgaatacctcaagagattgatgagc
cttcctaatcagaagtgggcagaaataattggacaggcaagccaaagcattgatatcctg
aagaaccaagatgttatcagatcagttctcaacatcctacagacaaacacaagtgttgcg
agttcccttgggccacacttcttcccacagatttcgctaattttcttggacatgcttaca
gtctacagaatgtacagcgagcttgtatcaagcacgattgctgaaggaggaccctttgcc
tcaaggacatcatttgtaaaactcttgagatctgtcaagagggaaaccctaaagttgatc
gagacttttgtggataaggcagaagatttaccacatataggaaagcagtttgttccacca
atgatggatcccgtacttggtgattatgctagaaatgtacctgatgcaagggagtctgaa
gttctgtcgttgtttgcaacaatcattaacaagtacaaaggggaaatgcttgaggatgta
cctcgtatatttgaggctgttttccagtgcactcttgagatgattactaagaactttgaa
gattatcctgagcaccgcctcaaatttttttctttgcttcgcgcaattggtactcattgc
ttccaagcattaatccagctttcaagtccgcaattgaagctcgtgattgattcgattaat
tgggcattcagacatacagagagaaatattgcagagactggccttagtctattgttggaa
attttgaaaaattttcaggcttcaggattccaaaatcaattctacaaaacttacttttta
acaattgagcaagagatttttgcagttctcacagacacattccacaaacctggtttcaag
ctccatgttttggtgctgcaacacttattttgtgtggttgatggtctaacggagcctcta
tgggatgcttcttcagtaccatatcaatatacagacaatgccatgtttgttcgagattac
accataaaactcttaggaacatcattccctaacatgacagtaaccgaggtgaccaagttt
gtagatggccttcttagttcaaaacatgatcttccaagtttcaaaaaccatattagagac
ttcctggtgcagtcgaaggagttctcagctcaggataacaaggatctatacgcggaagag
gctgctgcccaaagagaaagggagcgccaacgaatgcttgccattccagggctcattgcc
cctagcgaattgcaagacgagatggtagattcatag
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