Sorghum bicolor (sorghum): 8059266
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Entry
8059266 CDS
T01086
Name
(RefSeq) chaperonin CPN60-1, mitochondrial isoform X2
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8059266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8059266
03110 Chaperones and folding catalysts [BR:
sbi03110
]
8059266
03029 Mitochondrial biogenesis [BR:
sbi03029
]
8059266
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8059266
Enzymes [BR:
sbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
8059266
Messenger RNA biogenesis [BR:
sbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
8059266
Chaperones and folding catalysts [BR:
sbi03110
]
Heat shock proteins
HSP60 / Chaperonin
8059266
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
8059266
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
8059266
Exosomal proteins of other body fluids (saliva and urine)
8059266
Exosomal proteins of breast cancer cells
8059266
Exosomal proteins of colorectal cancer cells
8059266
Exosomal proteins of bladder cancer cells
8059266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
8059266
NCBI-ProteinID:
XP_002467123
UniProt:
C5WZF2
A0A921RZN8
LinkDB
All DBs
Position
1:complement(21889562..21895893)
Genome browser
AA seq
577 aa
AA seq
DB search
MYRAAASLASKARQAGSSAAARQVGSRLAWSRNYAAKDIKFGVEARALMLRGVEELADAV
KVTMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGD
GTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKNMARMISTSEEIAQV
GTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFITN
SKTQKCELDDPLILIHDKKVTNMHAVVKVLELALKKQKPLLIVAEDVESEALGTLIINKL
RAGIKVCAVKAPGFGENRKANLQDLAILTGGEVITEELGMNLENVEPHMLGTCKKVTVSK
DDTVILDGSGDKKSIEERAEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEA
EVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNAL
KTPVHTIASNAGVEGAVVVGKLLEQENTDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVD
AASVSSLMTTTESIIVEIPKEEAPAPAMGGGMGGMDY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcgcggccgctagcctcgcctccaaggcgcggcaagccgggagcagcgccgcc
gctcgccaggttggaagcaggcttgcctggagcaggaactatgctgccaaggacatcaag
tttggtgttgaggcccgtgctctgatgttgaggggtgttgaggagttggctgatgcggtc
aaagtgacaatgggtcctaaggggcgcaatgtggttattgagcaaagctttggtgcccct
aaagtcacaaaggatggtgtgactgttgcaaagagcattgaatttaaggatagagtaaag
aatgttggtgcaagccttgtgaaacaggttgctaatgcaactaatgacactgctggtgat
ggtaccacatgtgccactgttttgacaaaagcaatatttactgagggctgcaaatctgtc
gcggctggaatgaatgcaatggatttaaggcgtggaatctcaatggctgttgatgctgtt
gtgaccaatcttaagaacatggccagaatgatcagcacttcagaagaaattgcacaggtg
ggtacaatatcagcaaatggggaaagagaaattggtgagcttattgcaaaggctatggag
aaggttggcaaagagggtgtgatcactattgcggacggtaacacgctttataatgagctt
gaagttgtggagggtatgaaacttgacagaggttacatctctccgtacttcattacaaac
tcaaaaacccagaaatgtgaattggacgacccattgatcttaattcatgacaagaaggtt
acgaacatgcatgctgtggttaaggttttagaattggctctaaagaaacaaaagccttta
ctgattgttgcagaagatgtggaaagcgaagcattgggcactctgattattaacaagctt
cgtgcaggcatcaaggtctgcgctgtcaaagctcctggttttggagaaaacaggaaggca
aacttacaggacctcgctatccttactggaggagaggtaataactgaagagctaggaatg
aaccttgagaatgttgaacctcacatgctgggtacatgcaaaaaggtgaccgtctctaag
gatgacactgttattcttgatggatctggagacaagaaatctattgaagagagggcagag
cagattagatcggcaattgagaatagcacttcagattatgacaaggaaaagctccaggag
cggttggcaaagctctctggaggtgttgctgtactgaagattggaggagccagcgaagca
gaagttggtgagaagaaggatagagtcacagatgcactgaatgctacaaaagctgccgtt
gaagagggtattgtaccaggtggtggtgttgctcttctctatgcatccaaggagcttgat
aaattgcagacagcaaactttgatcagaagattggtgtgcaaatcattcagaatgctttg
aagacacctgtacacaccattgcctccaatgctggggtggagggagcagtagttgtgggc
aagcttttggagcaagaaaatactgacctgggttatgatgctgctaaaggtgaatacgtt
gacatggtgaaggctggtatcattgacccgctaaaggtgatcagaactgctttggtggat
gctgctagcgtgtcgtccctgatgaccaccacggaatccataattgtagagatccccaag
gaagaggcgccggctccagcaatgggtggtggcatgggtggaatggattactaa
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