Sorghum bicolor (sorghum): 8059275
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Entry
8059275 CDS
T01086
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8059275
03036 Chromosome and associated proteins [BR:
sbi03036
]
8059275
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
8059275
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
8059275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
8059275
NCBI-ProteinID:
XP_021303388
LinkDB
All DBs
Position
1:complement(22219024..22234390)
Genome browser
AA seq
1501 aa
AA seq
DB search
MNKDGILSDDKMAKMESVQPNGQLVDIIIIDSQSDENKIGVDTSTSIGDSSLKEYKEPPC
TTMDNNANEETSITDDDTESDSYESSLRESDNEQASASVEGTEVPLTEEEVEELVAEFLE
VESKAAQAQESLEKESLDKVEIEVRLELSERLQGDELESAVSTEMEQFQMQWENELDDLE
IRSSILLEQLDAAGIELPRLYKSIESQVPNVCETEAWKSRTHWAGSQVPEEANRSIKNAD
EYLQSRRPVRRKHGRLLEEGASGFLTGKIPVEDDDSVKCHEKSWSSFNELIKSKENAENT
FGSSNWASVYLASTPQEAAALGLQFPGVDEVEEISEVGGVFDDIKGVDEVELSEEQRRKY
RKVTEEDDAKIMKCLQRRLKGKRTRGWCKENIGLVSSCDEKPLPENGVLGAKSDLPSSKK
LKTDENKVSMETLKHTFEDDDNEKRLKTVIIESDDDMQTDNKRALQKDGEGSSTEVEKVV
DIIDLDLFPSQSPKLPTKSLPKTFKCTICSEMLNASDVHRHPVLDVVVCGSCRFLVIEKN
RLEDPVSGGYCTWCARSELLQSCSSCKLLFCTNCLSKNLGEECLSEAKATGWQCCCCIPS
QLELLISECDKALGGVESSDSESSNTELSGPENSATVSKRRMKKSIRRIMDDTELGEETK
RRIAMEKARQDHLKSMQEQSATKLRSENIGTPFEAPVKICLQDAGDGHIVNLAREEDEEP
VRIPSSMSSKLKPHQVEGIRFMWENVIQSVKKVKSGDKGLGCILAHNMGLGKTFQVITFL
YTVMRCAQLGLRTALVVTPVNVLHNWRKEFSKWRPAELKPLRVFMLEDVARVKRPDLLTR
WRVKGGVLLIGYSSFRNLSLGKHVKDKNSANEIAYALQVTYHVPAIGTVSSSLYCQCGPD
ILVCDEAHMIKNRRADITQALKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSTH
EFRNRFQNPIENGQHMNSTSDDVKIMNQRSHILFEQLKGFVQRKSMNVVKNDLPPKKVFV
ITVKLSQLQRKLYKRFLDVHGFSSSGYSEKSHSSFFAKYQTLAQVWNHPGLLQMAKEQRG
NLRREDTVENFMMDESSSDDNVENYLPNGEKQKDRADQQSKKSNIVNEESNWWEELLDEN
TYMEADYSGKMTLLLDILSKSSELGDKVLVFSQSLTTLDLVEFYLAKLQINGKEGKHWKR
GKDWYRLDGSTPSSERQNLVEMFNDPGNTRVKCTLISTRAGSLGINLHAANRVVLLDGSW
NPTHDLQAIYRVWRYGQTKPVYAYRLMAHRTMEEKIYKRQVTKEGLAARVVDRQQVSRTI
SKEEMLHLFEFGEEELMEQNENGSTIIEKPSTSDTIKTSEPVPVDSLMLSLLSEQTRWIS
GYHEHEALLQENEEERLTKEEKDMALSEWESLRKAALDSERKSNMSAAPTYPNVVRPLKP
ASRSRQLQQPKVNSNNQKKCNNLTHLLTLRSHGTKAGCTTTCDECGQEISWETLNRDGRS
R
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggatggaatattgtctgatgataagatggcaaagatggaatctgttcaacca
aatggacagctagtagatataataatcatcgactctcaaagtgatgaaaataaaattggt
gtggatactagtactagcataggagacagttcattgaaggagtataaggagcctccatgc
acaacaatggacaacaatgcgaatgaagaaacatccattactgatgatgatacagagtcc
gattcatatgaaagctctctccgagaatcagataatgaacaagcttcagcatctgtggaa
ggcactgaggtacctcttactgaggaagaagttgaagaattggttgctgaattcctcgaa
gtcgagagcaaagcagctcaagcgcaagagtcacttgaaaaggagtcactggacaaagtt
gaaattgaagtaagattggagttatctgagaggcttcaaggagatgagttagaatcagct
gtgtcaactgagatggagcaattccagatgcaatgggaaaatgaacttgatgatctagag
atccgtagttctattctgttggaacaacttgatgctgctggaattgaacttcccagactc
tataagtcaattgaaagtcaagttccaaatgtttgtgaaactgaagcatggaagagcagg
acacattgggctggttctcaagtgcctgaagaagctaaccgatccattaaaaatgctgat
gaataccttcagtctcgcagacctgtacggagaaaacacgggaggttgctggaggaaggt
gctagtggctttcttactggaaaaattcctgttgaggatgatgattctgttaagtgtcat
gagaaaagttggagctctttcaatgaacttattaaatctaaggagaatgctgagaataca
tttggtagcagtaactgggcatcagtttatcttgcaagcaccccccaggaagcagccgca
ttaggtctccagtttcctggagttgacgaggtagaggagatatctgaagttggtggtgtt
tttgatgatataaaaggtgtagatgaagtagagctttctgaggaacagagaaggaaatac
agaaaggttacggaagaggatgatgcaaaaataatgaagtgcctgcagcgtcgtttgaaa
ggaaaaaggacgaggggctggtgtaaggagaacattggtttggtctcatcatgtgatgag
aaacctctaccagaaaatggtgttttaggtgctaaaagtgatcttccttcatctaaaaaa
ctcaaaactgatgaaaacaaagtttctatggagacattgaagcatacatttgaagatgat
gataacgagaagagattgaaaactgttataatagaaagtgatgatgatatgcagacagat
aacaaacgagctttacaaaaggatggtgaaggtagttccacagaagtcgaaaaagtggtt
gatatcattgatcttgatcttttcccatcacaaagccctaagctccctactaagagtttg
cctaaaactttcaaatgtactatttgctctgaaatgttgaatgcctctgatgtgcatcgc
caccctgtcttggatgttgttgtttgtggatcatgcagatttcttgtgatagagaagaat
cgtcttgaggatcctgtatctggtggttattgcacttggtgtgcacgaagtgaactgctt
caaagttgtagttcttgtaagcttcttttctgtacaaattgcctgtcaaagaatttaggt
gaagaatgcttatcagaagctaaagccactggttggcagtgttgctgctgcatacccagt
caactggaacttttaatttctgaatgtgacaaggccctcggtggcgtggaatcttctgat
tcagagagtagcaacacagagctttctggaccagagaatagtgcaactgttagcaagcga
agaatgaagaagagtattagaagaattatggatgatacagaacttggtgaggaaacaaag
cgtagaattgcaatggagaaggcaaggcaagaccatttgaagtccatgcaagagcaatct
gccaccaagttaaggagtgagaatattggaactccctttgaagctccagtgaaaatctgt
ttacaggatgctggtgatggacatatagtcaaccttgccagggaggaggatgaggaacct
gttaggattccaagcagcatgtcttctaaactgaaacctcatcaggtagaaggaataagg
tttatgtgggaaaatgttattcaatctgttaaaaaggtcaaatccggggataaaggtctt
gggtgcattttggcgcataacatgggccttgggaaaacctttcaggttattacattcctc
tatactgttatgagatgtgctcaattgggattgcgcacagcacttgttgtcacccctgtc
aatgttcttcataactggaggaaagagtttagcaagtggcgtccagcagagctgaaacct
cttcgtgtttttatgttggaagatgttgcaagggtgaaaaggccagatttactaaccaga
tggcgagtgaagggtggagtgcttctcattggttattcatcatttaggaacttatccctt
ggaaagcatgtgaaggacaaaaattctgcaaacgaaattgcttatgctttgcaggtgacg
taccatgtccctgctatcggtactgtttcaagttcactgtactgccagtgtgggccagat
attcttgtatgtgatgaagcacatatgataaagaacaggagggccgacattacgcaagct
ctgaaacaagtaagaacacagagaagaattgctttaactggatctccgttgcagaataat
ttgatggaatattattgtatggttgattttgtcagggaaggttttcttgggagtactcat
gaattccgaaacaggttccagaacccaattgaaaatgggcaacacatgaattcaacatca
gatgatgtcaagatcatgaaccaacgatcacacatcttgtttgaacaactgaaaggtttt
gtccagcggaagagcatgaatgttgtgaagaatgatctaccaccaaagaaggtttttgtt
attactgtaaagctctctcagctgcagaggaagctatacaaaaggttcttagatgttcat
ggtttctcaagtagtggttattcagaaaaatctcacagttccttctttgccaagtaccaa
acattagcccaggtatggaatcatccggggctcctccagatggctaaagaacagagagga
aatttgcgtcgtgaagacactgttgagaactttatgatggatgagagttcaagcgatgat
aatgttgaaaattacttgcctaatggagagaagcagaaggatagagctgatcagcagtcc
aaaaaaagcaacattgtgaatgaggaaagtaactggtgggaggaacttttagatgagaat
acctatatggaagcagattacagtggcaaaatgaccttgctcctagatatcctgtcaaaa
agttctgaattaggcgacaaagtattagtttttagccagagtttgaccactctggattta
gtggagttttatctggcaaaactgcaaatcaatggaaaagaaggcaaacactggaagcga
gggaaggattggtacaggcttgatgggagcactccatcttctgaacggcagaatctcgtg
gagatgtttaatgaccctggaaacacaagagtgaaatgcacgttgatatcaactcgtgct
ggatccctgggtatcaaccttcatgctgcaaatcgcgtggttcttctggatggatcatgg
aatccaacacatgatttgcaagccatttatcgggtttggaggtatggccagaccaaacct
gtatatgcctaccgcctaatggcacatcgaacaatggaagagaaaatatataagcgccag
gtgacaaaagaaggccttgcagcaagggtggtggatagacagcaagtttcaagaaccatt
tccaaagaagagatgctgcatctttttgaatttggtgaagaggaattaatggaacagaat
gagaatggttctaccataattgagaagccatccacttctgacactattaaaacctctgag
cctgtacctgtcgacagtctcatgctgagcctactcagtgagcaaactcggtggatttca
ggttaccatgaacatgaagctctcctccaagaaaatgaagaagaaaggcttacaaaggag
gagaaagatatggctttgtcagagtgggagtcattgaggaaagctgcacttgattccgag
agaaaatcaaacatgagcgcagctccaacatatcctaatgttgtgcggccacttaagcct
gcttcgagaagccggcaactgcagcaacctaaggttaactcaaataatcaaaagaagtgc
aacaacttaacccacttgctgactctaagaagtcatggcacgaaagcagggtgcacgaca
acctgtgacgagtgtggccaggagattagttgggagactctaaacagagatggcagatcg
agatga
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