Sorghum bicolor (sorghum): 8059353
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Entry
8059353 CDS
T01086
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
8059353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8059353
Membrane trafficking [BR:
sbi04131
]
Endosome - Golgi transport
Others
AP-4 complex
8059353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
HEAT_2
Cnd1
INTS1_R4
HEAT
HEAT_EZ
PDS5
NPHI_C
Motif
Other DBs
NCBI-GeneID:
8059353
NCBI-ProteinID:
XP_002458982
UniProt:
C5XG75
A0A921RJW6
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All DBs
Position
3:complement(70953925..70962300)
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AA seq
969 aa
AA seq
DB search
MEQLRTIGRELAMGSQGGWGQSKEFLDLVKSIGEARSKAEEDRIIARELEHLKRRLADPD
VPRRKMKELLLRLVYAEMLGHDASFGHIHAVKMTHDESLPLKRTGYLAVALFLDERHDLV
ILVVNTIQKDLRSDNYLVVCAALTAACRLIGEEAIPAVLPQVVELLAHPKEAVRKKAVMA
LHRFYQRSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLYDLILEEPNSYKDLVVSFVNIL
KQVAERRLPTSYDYHQMPAPFIQIKLLKILAVLGSGDKQASGHMYTVLGDIFRKGDTASN
IGNAILYECICCISSIFPNPKMLEAAAETTSKFLKSDSHNLKYMGIDALGRLIKINPDIA
EEHQLAVIDCLEDPDDTLKRKTFELLYKMTKSTNVEVIVDRMIEYMINITDHHYKTEIAS
RCVELAEQFAPSNQWFIQTMNKVFEHAGDLVNIRVAHNLMRLIAEGFGEEDEGADSQLRS
SAVDSYLRIVGEPKLPSSFLQIICWVLGEYGTADGKYSASYIIGKLCDVAEAHLTDDTVK
AYAISAILKIFAFEIALGRKIDLLPECQTLVDELSASHSTDLQQRAYELQALLGLDKNAV
ESVMPADASCEDIEVDRNLSFLNSYVQQALENGASPYIPESERSGVISVGSYRSQEQQET
SAHTLRFEAYEMPKPSLPLATSQTSISTPTTDLVPVPETGYYKEDHQTSRSQPPGDAVSG
EFGVKLRLDGVQKKWGRPTYSSSTPSSSTSSQQTTNGTSHSDGGGSSSQPRESSYGSKRQ
QGTEVSAEKQRLAASLFGSAAAKADRKAQASRKTAKDSPSTEKVATTNVTAQPVKEQVIP
AAPPPDLLDLGDEPVSSNPPLADPFSQLEGLLGPASAAPVLSGTPATGASKAPDLMSIFS
DDVPTGVASGSTDPTLGDVNSTSSHKGATAVASKKGPSLQDALQKDATARQVGVTPTGNN
PNLFKDLLG
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctgcggacgatcgggcgggagctggcgatggggtcacagggcgggtggggg
cagtccaaggagttcctcgacctcgtcaagtccattggcgaggcgcgctccaaggcggag
gaggaccgcatcatcgcgcgcgagctcgagcacctcaagcgccgccttgcggaccccgac
gtgccacgccgcaagatgaaggagctcctcctccgcctcgtctacgccgagatgctcggc
cacgatgcctccttcggccacatccatgccgtcaagatgacccacgacgaatcgctcccg
ctcaaacgaaccggctacctcgccgtcgcgcttttcctcgatgagcgccacgaccttgtc
atcctcgtggtcaacaccatccagaaggacctcaggtcggacaactacctcgtcgtctgc
gcagcgctcaccgccgcgtgccgcctcatcggtgaggaggccatccctgccgtgctgccc
caggtcgtagagctgctcgcgcaccccaaggaggctgtgaggaagaaggccgtcatggca
ctacaccggttctaccagcgatcaccctcctccgtctcccaccttgtctccaacttccgg
aagaggctctgtgataatgatcccggggtgatgggtgcaactctatgccccctctatgac
ctgattttggaggaaccaaattcgtacaaggatttagttgttagttttgttaacatccta
aaacaagttgcggagaggaggcttccgacttcctatgattatcaccaaatgcccgcaccg
tttattcagataaaactattgaagatacttgctgtgcttggtagtggtgataaacaagca
agtgggcatatgtacaccgtattgggtgacatattcaggaagggtgacactgcgagcaac
attggcaatgctatactgtatgaatgcatatgctgtatttcatccattttcccaaaccct
aagatgctagaggctgcagcagaaacaacatcaaagtttctgaagagtgatagtcataat
cttaagtacatgggcattgatgctcttggccggctaataaaaataaatccagatattgca
gaagagcaccagctggctgtcattgattgcttagaggacccagatgatactttgaagcgc
aagacctttgagcttctttataagatgacaaagtcaacaaatgttgaagtgattgttgat
aggatgattgagtacatgatcaatataactgatcatcattacaagacagaaattgcatca
cgttgtgttgaacttgcagagcaatttgcgcctagcaatcagtggttcatccagaccatg
aacaaagtctttgagcatgctggagatcttgtcaacatcagagtggcacacaatttgatg
cggctaattgctgaaggctttggagaggaggatgaaggtgctgacagtcagctaagatca
tcggctgtagattcctatctccgcattgtcggagagccaaagcttccttcttcgttcctg
cagataatatgctgggttttgggggaatatggaacagcagatggaaaatattctgcatct
tatattatcgggaagttgtgtgatgtggcagaggcccacctcactgatgacactgtcaag
gcgtatgcgatctcagcaattctgaagatatttgcgtttgaaatcgcacttggaaggaag
attgatttgctgcctgagtgtcaaacactggtagatgaattgtcagcttcacattcaaca
gacttgcagcaacgtgcatatgagctacaggctttactaggcttggacaaaaatgctgtt
gaaagtgttatgcctgcagatgcaagttgtgaagatattgaggtcgacagaaacctctca
tttctaaacagttatgtgcagcaagccttggaaaatggtgcgtccccttacattccagag
agtgaacgctctggtgttataagtgttggcagctacagaagccaagaacaacaggaaaca
tctgcccatactcttagatttgaggcctatgagatgcctaaaccttcgttgccactagca
acttcacaaacaagcatttccacaccaactactgacctggttccagttccagagacaggc
tactataaggaagaccatcaaacatcaaggtctcaaccaccaggtgatgcagtttctggt
gagtttggtgtcaaacttcgccttgatggggttcaaaagaaatggggaaggccaacatat
tcctcttctacaccctcaagctcgacgtctagtcaacaaactaccaatgggacctctcat
tccgatgggggagggtcaagttcgcagccacgggagtcctcgtatggttctaagagacag
cagggcacagaagtttcagcagaaaagcaacggctggctgcttcactttttggttcggca
gcagctaaagctgataggaaagcacaagcttctagaaagacagcaaaggacagtccctca
actgagaaagtagctaccactaatgtgactgcccagcctgttaaggagcaagtaatccct
gctgcaccaccgcctgatctgctggatctgggtgatgagccagtttcatcaaatcctcca
ttggctgatcctttctcacagttagaggggcttcttggaccagcatcggctgctccggtg
ctttctggaactccggctaccggcgcttccaaagcaccagatctgatgtcaatcttctca
gatgatgtaccaactggagtggctagtggatccaccgatcccactctaggtgatgttaat
tcgacgagctcccacaaaggagcaactgcagtggcttcaaagaagggtccaagccttcaa
gatgccttgcaaaaggatgctactgcacggcaagtaggcgtgacaccaacagggaacaat
cccaatctcttcaaggacttgctaggctaa
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