Sorghum bicolor (sorghum): 8059482
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Entry
8059482 CDS
T01086
Name
(RefSeq) serine/arginine-rich splicing factor RS31
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8059482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8059482
Spliceosome [BR:
sbi03041
]
Common components
Common spliceosomal components
SR proteins
8059482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
SET_assoc
RRM_5
RRM_3
DUF2129
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
8059482
NCBI-ProteinID:
XP_002465986
UniProt:
A0A921S819
C5X118
LinkDB
All DBs
Position
1:79622097..79627682
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AA seq
266 aa
AA seq
DB search
MRPVFCGNFDHDTRQYDLERLFSKYGSISRIDMKTGYAFIYFEDERDAEDAIRRLDNVSF
GYDRRKLSVEWSRQVEPVPKSRDRPTGDVKPTRTLFVINFDPMRTKVQDIERHFEPYGKI
ANIRIRRNFAFVQYETQEEASAAVKNTDKSTILDRVVTVEYAFRDDDSERDDRYGSPKRG
AYDRRRGNPYLRSPSPRYRREYSPDYDRRGRYPGYDRRDGAMYERRSPVYDRYNRGRSPV
YDRYNRGRSPVYDGYDRRGSPGYDQY
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggtgttctgcggcaacttcgaccacgacacccgccagtatgacctcgagcgc
ctcttctccaagtacggctccatcagccggatcgacatgaagacaggctatgctttcatt
tactttgaagatgagcgtgatgcagaggatgctataaggcgcctcgacaacgtgtctttt
ggttatgacaggcgcaaactctctgtagaatggtccaggcaagttgaaccagtgccaaag
agccgtgatagacctactggggatgtaaagccaacgagaaccctctttgttatcaatttt
gaccccatgcgcactaaggttcaagatatcgagaggcatttcgaaccttacggcaagatt
gccaacattcgcattcgaaggaactttgcgttcgtacagtatgagacacaagaggaagct
agtgctgctgtcaagaacactgacaagagcaccatattggacagggtagtgactgttgaa
tatgccttccgggatgatgacagcgagagagatgacagatacggcagccccaagcgaggt
gcttatgacaggcgtcgtggtaacccctacttgcgctcacctagcccaaggtaccgaagg
gagtacagtccagattatgatcggcgtgggcgttatcctgggtatgatcgccgtgacgga
gcaatgtatgaaaggcgaagccctgtatatgatcgctacaataggggcagaagccctgta
tatgatcgctacaacaggggcagaagccctgtttatgatggctatgataggagaggaagc
cctggctatgatcaatattag
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