Sorghum bicolor (sorghum): 8059538
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Entry
8059538 CDS
T01086
Name
(RefSeq) probable helicase CHR10 isoform X5
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbi03036
]
8059538
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
8059538
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
8059538
NCBI-ProteinID:
XP_002468705
LinkDB
All DBs
Position
1:complement(80675820..80698392)
Genome browser
AA seq
853 aa
AA seq
DB search
MAAPATSYERRLLAAADLVLSADAQDQGTRLPDLGVTADLKPHQLHGVAWLIRRYRLGVN
VVLGDEMGLGKTLQAISLLSYLKIQRIAPGPFLVLCPLSVTDGWLSEFSKFCPSFRVLQY
VGDKLHRRDLRRTIYEDVQKASTSSRSNDLPFDVLMTTYDIALMDQDFLSQIPWHYAVID
EAQRLKNSSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCLPSIFGKLDEFLS
TFKEAGESLTVDEANKAKGQFKILKHILKAFMLRRTKALLIESGILVLPPLTELTVMVPL
TQLQKKLYMSVLRKELPTLISFTRGSSRHQSLQNIVIQLRKACSHPYLFSGIEPEPYVEG
EHLVQASGKLIVLDFVLKKLHECGHRVLLFAQMTQTLDILQDFLELRKYTYERLDGSVRA
EERFAAIRNFSSQSTKGLIRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQA
DKQALQRAHRIGQLNHVLSINLVSQRTIEEVIMRRANRKLKLSHNIIGEEDGTDGKGGDP
GHEASDMRSIIFGLHLFDPADTATETINEDTAAETISVEKLAKLKTMSEKVVMMRSHESS
EKDERAFEINPNMTDDNGTVIRRASDSIRIDPGLNEAAYLSWVEKFKEASGSSEDATVEF
GRQRAAPEEKLLKRDVNKKKIEEKRLAKWESLGYQTLAVKEPDITTSQNISAAGSIQFVY
GDCTDPSKVCPKKPAIIFSCIDNSGTWGHGGMFDALTSLSTCIPDAYHRASKFDDLHMGD
LHLIQLDAAIHMPRIGYQGGSQRSEWYTIERLLRKYSSLHGIDIFVYYFQRSSRQQADSN
IGHADDSAQSNPS
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcctgcgacctcctacgagcgccgcctgctcgcggccgccgacctcgtcctc
tccgccgacgcccaggatcaagggacccgcctcccggacctcggtgtgacggccgacctc
aagccgcaccagctccatggcgtcgcctggctcatccgccgctaccgcctcggcgtcaac
gtcgtcctcggtgatgagatggggcttggcaagaccctacaagcgatttctctattgagt
tatctcaagatccagcgtattgcacctggaccatttctggtcttatgtcctctaagcgtc
acagatggctggctgtcagaattcagtaaattctgtccttccttcagggtgctgcagtat
gttggtgataagcttcaccggcgtgaccttcggaggaccatctacgaagatgtacagaaa
gcttccacatcatctcgatccaacgacttaccatttgatgtgctcatgacaacatatgac
atagccttgatggatcaagatttcctttcacaaattccctggcactatgcagttattgat
gaagctcaacgtcttaaaaattcatccagtgtactgtataatgtccttgagcaacgtttc
atcatgccaagacgtctactactaacaggcactcctatccagaacaacctttctgaatta
tgggcattgatgcacttttgtctgccttcaatatttggaaagctggatgagttcctttct
acatttaaggaagcaggggaatcattgacagttgatgaagctaataaagcaaaaggacaa
ttcaagatccttaaacatatactcaaggcatttatgctacgtcggacaaaagctttacta
atcgagagtggaattctggtgctgcctccactaactgagctaacagtgatggtgccgctg
acacagttacaaaagaagctttacatgtcagtgttgcggaaagagctgccaacacttatt
tcatttactagaggatcatctcgtcaccagtctttgcaaaacattgtaatacaactgagg
aaagcttgcagtcacccatatctgttcagtggcattgaacctgagccttatgtggaaggg
gagcatttagttcaggctagtggaaagctcattgtcctagattttgtcctgaagaagctc
catgaatgtggacatcgtgttttgctatttgctcagatgacccagacacttgacattctt
caggatttcctagagctacgcaagtacacttatgagcgcctagatggttcggtacgtgct
gaggaacggtttgcagcaataagaaatttcagttctcaatctacgaaaggtcttatcaga
gatgataatcaaagtggagcatttgttttcatgatatcaactagagcaggtggtgtgggg
cttaatctcattggtgccgatactgttattttttatgaacaagattggaatcctcaagct
gacaaacaggccctacagcgtgctcaccgcattggacagttgaaccatgtgttgtcaata
aatttggtgtcacagcgcacaattgaagaggtcataatgcgaagagccaacagaaaactt
aagcttagccataatattattggagaagaggatggaactgatgggaagggaggagatcca
ggacatgaagctagtgacatgagatcaattatctttggcttgcacctgtttgatccagca
gatacagccacagaaacaatcaatgaggatacagctgctgagacaatcagtgtggagaaa
ctggcgaagttaaaaacaatgtctgaaaaggttgtcatgatgcgtagccatgagtcttca
gaaaaggacgaacgggcatttgagataaatccaaatatgactgatgacaatggaactgtt
attagaagggcttccgattctattcgcattgatcctgggctaaacgaagctgcataccta
tcctgggtcgagaagttcaaagaggcttccggttctagtgaagatgccacagttgaattt
ggaaggcaaagagcggcgcctgaagaaaagcttctgaaacgtgatgttaacaagaaaaaa
atagaagaaaagagattggccaaatgggaaagtttgggttaccaaacactagcagttaag
gaacctgatatcacaacaagccagaatatttcagcagcaggatccatccaatttgtatat
ggagattgtactgatccttcaaaagtttgtcctaaaaagcctgccatcatattcagctgc
atagataattctgggacttgggggcatggaggaatgtttgatgctttgactagtctatcg
acatgcattccagatgcttatcaccgtgcttctaaatttgatgacctccacatgggtgat
cttcacttgattcagcttgatgcggctatccacatgccccgaattggttatcaaggtggc
tcccaacgatcagaatggtatacaatagagcgcctgctcaggaaatactcatctctccat
ggaatcgacatttttgtgtactactttcagcgttcatccagacaacaggcagattctaac
ataggtcatgctgacgattctgctcaaagcaacccaagctag
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