KEGG   Sorghum bicolor (sorghum): 8059542
Entry
8059542           CDS       T01086                                 
Name
(RefSeq) DNA repair endonuclease UVH1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03420  Nucleotide excision repair
sbi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    8059542
   03460 Fanconi anemia pathway
    8059542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbi03032]
    8059542
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8059542
DNA replication proteins [BR:sbi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    8059542
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     8059542
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 8059542
NCBI-ProteinID: XP_002466046
LinkDB
Position
1:80827026..80848809
AA seq 1032 aa
MWPTARLSTSPVTLSSPDSPGKKKAKAVGFSQAAAAAAAAMLAFEEQVVADLVEDPNGGL
VVLSSGLPLASLAATLLLYLHQAPGDAAGGGCLLVLSAPDSLKARIRRRLQEKMQVHDVP
PDLQAQQRASLYASGAALFLSPRALAADLLTSRLLPSRVRALLLLSAHRSTDTSSDAFIA
RLLRQRNLVPVYAFSDCPHAMVAGFSKAERTMKSLYVRRLHLWPRFHVLAAADLERAPPD
VVDVRVPMTPPMRGIQAAVLATMDACLKELRRTNKVDVEDLTVDKGLFKSFDEIVRRQLD
PIWHTLGKKTKQLVADLRTLRKLLDYLVRYDAVTYLKYLDTLRVSEGVRSVWILADSSHK
IFELAKRRVYQAVRTDGAKVSMDNKGTPTKKRKVAHNTTKKGKETENEDSTVGRDNTQKV
NTDVGIVLEEVLEEAPKWKVLWELLQEIAEEQMKSDAGNVHDEDKSDEHGIVLVTCKDER
TCLQLQECILKGPCQVMREEWEKYLIGKAELHGLNKKNKRKSEQPKGVGVLDGEVQMGSS
ESVGPVSISKLETNALFAAACELRNISNEADVNGGSNSSCSTKGLARGKAKGKPKKTTAK
RQASNRKNKSKGGNDIRQATDLDSEVQSGKTDEQAEIDASKVSAYDASVSASTSNDKFNH
SSALRNSANGKPLPPVQFHALDSDQHVLDVWKPSVIIVYHPDITFVREIEVYKAENSSKK
LKVYFLFYEDSTEVQKFESSIRRENEAFESLIRQKSLMMIPVDQDGHCIGPTVANEPEPL
LCQNSITRKAGGKKAPEKEMQVIVDMREFMSSLPNVLHQKGIRIVPVTLEVGDYVLSPSI
CVERKSIADLFQSFASGRLYNQVETMARYYKIPVLLIEFSQDKSFSFQSANEIGDDVSPT
NIISKLSLLVLHFPRLRIIWSRSLHATAEIFMSLKTNQDEPDEKKATRVGVPSEDGIVED
DVRSENYNTPAIEFLRRLPGVTDSNYRAIMDGCNSLADLALLPVERLGELMGGQKAARTL
KEFLDAKCPTML
NT seq 3099 nt   +upstreamnt  +downstreamnt
atgtggcctacggcccgcttgagcacaagcccagtaaccctatcatcgcctgactcgccg
gggaagaagaaggcgaaggccgtcgggttctcgcaggcggcggcggcggcggcggcggcg
atgcttgctttcgaggagcaggtggtggcggacctggtggaggatccgaacggaggtctg
gtggtgctctcctcgggcctccctctggcctccctcgccgctaccctcctcctctatctc
caccaggcccccggcgacgcggcggggggaggatgtctcctcgtcctctccgcccccgat
tccctcaaggcccggatccgccgccgcctccaagaaaagatgcaggttcacgacgtgcct
cctgacctccaagcgcagcagcgcgcctccctctacgcctcgggcgctgctctcttcctc
tccccccgcgccctcgccgccgacctcctcacctcccgcctcctcccctcccgcgtccgg
gccctactcctcctctccgcccaccgctccaccgatacctcctccgacgccttcatcgcc
cgcctcctccgccagcgcaatcttgtccccgtctacgccttctccgactgccctcatgcc
atggtcgccggtttctccaaggccgagcgcaccatgaagagcctctacgtccgccgcctc
cacctctggccccgcttccacgttctcgccgcggccgacctggaacgcgccccgcctgac
gtcgtagacgttcgcgtgcccatgacgccgcccatgagggggatccaggctgccgtcctc
gctaccatggacgcttgcctcaaggagcttaggcgcaccaacaaggtggatgtcgaggac
ctcaccgtcgacaagggcctcttcaagtctttcgatgagatcgtccggaggcagctcgac
cccatctggcatactcttgggaagaagacaaagcagcttgtggctgacctcaggacgcta
cgcaaactgcttgattacctcgtcaggtacgatgctgttacatacttgaagtaccttgac
acattgagagtgtcagaaggtgtgcgatcagtttggatacttgctgactcaagccataag
atatttgagcttgcaaaaaggcgcgtttaccaggcagtgagaacagatggtgctaaggtt
agcatggataataagggcacaccaacaaagaagaggaaagtggcacataatactaccaag
aaaggaaaagaaaccgaaaatgaagactccacagtaggtagggacaacactcagaaggtt
aatactgatgtgggcattgtattggaagaggttctggaggaggcaccgaaatggaaagtg
ttatgggaattgttgcaagagatagcagaagaacagatgaagagcgatgccgggaatgtg
catgatgaagacaaaagtgatgaacatggcatagttttggtaacatgtaaagatgagcgc
acgtgcttgcagctgcaggaatgcatattaaaaggcccctgtcaggttatgcgagaagag
tgggagaagtatttgattgggaaagctgagctgcatggattgaataagaagaacaagaga
aaatctgagcaaccaaaaggggttggtgttctggatggtgaagttcaaatgggatctagt
gagagtgtgggtccggttagcattagcaaactcgaaactaatgccttatttgctgctgcc
tgtgaattaagaaatatatcaaatgaagcagatgtcaatggtggctcaaatagcagctgc
agcacgaaggggctagcaaggggaaaagcaaaagggaaaccaaagaaaaccactgcaaag
agacaagccagcaatcgaaaaaataaaagtaaggggggaaatgacattaggcaagctacc
gatctggattctgaagttcaatcaggcaaaacagatgaacaggctgagattgatgcttct
aaggtgtccgcatatgatgcttccgtgtcagcctctacttctaatgataaatttaaccat
tcatctgctctcagaaactcggcaaacggcaagccactacctcctgtgcagtttcatgct
ctagacagtgaccagcacgtgcttgatgtatggaagccatctgttattattgtttatcat
ccagatattacctttgtaagagaaattgaagtatacaaggcagaaaactcatcaaagaag
ttaaaagtttacttccttttttatgaagattccactgaggtgcaaaaatttgagtccagc
attcgacgggaaaatgaagcatttgaatctttgatcagacagaagtccctgatgatgata
cctgttgatcaggatggccattgcattggaccaactgttgcaaatgaaccagaacctctt
ttatgtcagaactcaatcacaagaaaggcaggtggtaaaaaggcacctgagaaggagatg
caggttattgtagacatgagagagttcatgagcagccttccgaatgtattacatcagaaa
ggtatccgaatagtaccggtcacccttgaagttggtgactatgttctctctccttcgatc
tgtgttgagcggaaaagtatcgcagacttgttccaaagctttgcttctggtcgtctgtac
aatcaggttgagacaatggcacgttactacaagatcccggttctcctcatcgagttctca
caagataagagcttttcctttcagtctgcaaatgagatcggggatgacgtctctccgacc
aacattatctcaaagctttcgctgctagtgcttcattttcctcggcttcgcataatctgg
tcacgcagcttgcatgctacagcagaaatatttatgtcactgaaaacaaaccaggatgaa
cctgatgagaaaaaggcaacaagagttggcgtgccctctgaggatggaatcgtggaggat
gatgtgaggtctgaaaattacaacacaccagccattgagttcttaagaaggcttcctggg
gtgacggattccaactaccgagcaatcatggatggatgcaatagcttggccgacctggcc
ctgcttccggtggaaaggttgggggagctaatgggcggtcagaaggctgcacggacgctc
aaggagtttctggatgccaagtgcccaaccatgctgtag

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