Sorghum bicolor (sorghum): 8059613
Help
Entry
8059613 CDS
T01086
Name
(RefSeq) chaperone protein ClpD1, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sbi03110
]
8059613
Chaperones and folding catalysts [BR:
sbi03110
]
Heat shock proteins
HSP100
8059613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
nSTAND3
NBD_SMAX1
AAA_7
AAA_14
IstB_IS21
NACHT
AAA_18
TniB
Zeta_toxin
Torsin
YkoP
Motif
Other DBs
NCBI-GeneID:
8059613
NCBI-ProteinID:
XP_002452189
UniProt:
C5XTC1
A0A921R613
LinkDB
All DBs
Position
4:51171636..51176642
Genome browser
AA seq
957 aa
AA seq
DB search
MEVCCCSTSSSSSVLTVGHGGAARMLAAPAGRWGAAAGFGRAMVLAHQLPLPLPLPLPRP
AARARARPAPRRRRGGGVVRAVFERFTERAVKAVVLSQREARGLGEPAVAPRHLFLGLVA
EDRSSGGFLSSGINIERAREECRGIAAARDDADSTAAPSSRPGSGGLDTDVPFSATAKQV
FDVAVVLSKNMGASFISPEHLAIALFTLDDPTTNNLLRSLGADPSHLASVAVDRLQAELA
KDGREPAEPSSFKVPKKAPAGAGRSAFSHSLTKKKDKGALDQFCLDLTTQASGGFIDPII
GREDEIERVVQIICRRTKNNPILLGEAGVGKTAIAEGLALRIANGDVPIYLVAKRILSLD
VGLLIAGAKERGELESRVTNIIREVREAGDVILFIDEVHNLIGSGTVGKGKGSGLDIGNL
LKPALARGELQCIAATTLDEHRMHFEKDKALARRFQPVLVDEPSQEDAVKILLGLREKYE
TYHKCKFTLEAINAAVYLSARYIPDRQLPDKAIDLIDEAGSRARMESFNKKKEGQSSILL
KSPDEYWQEIRAAQAMHEVVLSNKAKYSPNENAQESGSATVEAPSRDNIESTSGSSLSAD
EPIVVGTEEIARVASLWSGIPVQQLTADDKKLLVGLDDELRKRVIGQDDAVVAISRAVKR
SRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSESAMLRLDMSEYMERHTVSKL
IGSPPGYIGYGETGTLTEAVRRKPFTVVLMDEIEKAHPDIFNILLQIFEDGHLTDSQGRK
VSFKNTLIVMTSNVGSTTISKGRQSIGFLKEDTESSSYFAMKSLVMEELKAFFRPELLNR
IDEMVVFRPLEKTQMLAILDIILKEVKGRLLALGIGLEVSEAMKHLICQEGYDKSYGARP
LRRAVAHIIEDVISEAILFGEFKPGDTILMDIDAEGKPCMNHLDRQIVQVSDPTRTF
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtgctgctgctcgacctcctcgtcgtcgtccgtcctcaccgtgggccacggc
ggcgccgcgcggatgctggcggcgccggcgggtcggtggggcgcggcggcggggttcggg
agggcgatggtgctggcgcaccagctcccgctcccgctcccgctcccgctcccgcgcccg
gcagccagggccagggccaggccggccccgcggcgccgcaggggaggaggagtcgtcagg
gcggtgttcgagcggttcacggagcgggccgtcaaggcggtggtgctgtcgcagcgggag
gcccgggggctcggggagcccgccgtggcgccgcgccacctcttcctcggcctcgtcgcc
gaggaccgctcctcgggcgggttcctctcgtccgggatcaacatcgagcgcgcaagggag
gagtgccgcggcatcgctgccgccagggacgacgccgactcgacggccgcgccgtcgtcc
aggcccggatcgggggggctcgacacggacgtgcccttctccgccaccgccaagcaggtc
ttcgatgtcgccgtcgtgctgtccaagaacatgggcgccagcttcatctcgcctgagcac
ctcgccatcgcgctcttcaccctcgacgatccaaccaccaacaacctcctaaggagtttg
ggagcggatcccagtcacctagcatcagttgcggtcgaccgtctccaagcggagcttgcg
aaagatggcagagaacctgccgaaccgtcgtctttcaaagtcccaaagaaagcccctgct
ggagccggaagatctgccttctcccactccttgactaaaaagaaagataagggtgcactg
gatcaattttgtttggatttgaccacacaagctagtggaggtttcattgatcctattatt
ggccgtgaagacgagattgaaagagtagttcagataatatgccgacggacgaagaacaac
cctattcttctgggtgaggcgggtgttggcaaaactgcaattgctgaggggctggctctt
cgaattgcaaatggagatgtccccatttaccttgtggcaaagcgtatattgtcactggac
gttggtctacttattgctggtgcaaaggagaggggtgaactggagtctagggtcactaat
ataatccgtgaagtccgggaagcaggcgatgttattctttttatcgatgaggttcacaat
cttattggatctggaactgttggaaagggtaagggttctggtcttgacattggcaacttg
ctgaagcccgcacttgctagaggtgaactgcagtgcattgcggctacaactctagatgaa
caccggatgcattttgagaaggataaggctttggcccgccgcttccagccagtattagta
gatgagcctagtcaggaagatgctgtgaagatattactgggtcttcgtgagaaatatgaa
acttaccataaatgcaaattcacattggaagccatcaatgcagcagtttatttgtcagca
agatacattcctgacagacaacttcctgataaggctattgatctgattgatgaggctgga
agtagggctcggatggaatcatttaataagaagaaggaagggcagtcttcaattctcttg
aaatcaccagatgagtactggcaagagataagagctgctcaggccatgcatgaagtggtg
ttatctaacaaggcaaaatattctccaaatgagaatgctcaagaaagtggtagcgctacc
gttgaagcaccaagtcgagacaatatcgagtcaacatctggttcctcactctcagctgat
gaaccaattgtagttgggacagaggaaattgcaagagttgcctcattatggtctggaata
ccagtgcagcagttgactgccgacgataaaaaacttctagtaggactagacgacgagctc
agaaaacgtgtcattggtcaagatgatgctgttgtggccatatctcgtgcagtgaagaga
tcacgtgttggccttaatgaccctgacagacctattgccacgctgcttttctgtggtcca
acaggagttggtaaaacagagctcaccaaagctctagcagctagttattttggatcggaa
tctgctatgcttaggttagacatgagcgagtatatggagaggcacactgtgagcaagctc
ataggttctcctccagggtacattgggtatggtgaaactggtactttgacagaagcagtc
aggagaaaaccatttaccgtggtattgatggatgagatagagaaagctcaccctgatatt
ttcaacatccttctccaaatctttgaggatggacatttgacagactcacagggccgtaag
gtttccttcaaaaatacgttgattgtcatgacttcgaatgttggttcgacaacaatttca
aagggacgacagagcataggtttcttgaaggaagataccgagtcaagctcgtattttgca
atgaaatccttagtaatggaagagctcaaggcatttttccgtccagagttgctcaatagg
attgacgagatggttgtgttccgtcctctggagaagactcagatgctggccattcttgat
atcatcctaaaggaagtcaagggccgacttttggcccttgggataggtttggaggtgtct
gaggcaatgaagcacctgatttgccaagaaggctacgacaagagctatggtgctcggcct
ctgaggagagctgttgcccacattatcgaggatgtcattagtgaagctattctttttggc
gagttcaagcctggtgacacgatactgatggacattgatgcagaggggaagccatgcatg
aaccatctggaccgacagatcgtccaggtctctgacccaacacggacgttctga
DBGET
integrated database retrieval system
