Sorghum bicolor (sorghum): 8059617
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Entry
8059617 CDS
T01086
Name
(RefSeq) heat stress transcription factor A-3
KO
K09419
heat shock transcription factor, other eukaryote
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8059617
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
8059617
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Nup88
CC_Bre1
TolA_bind_tri
PBECR2
PSME4_C
APG6_N
Motif
Other DBs
NCBI-GeneID:
8059617
NCBI-ProteinID:
XP_002453922
UniProt:
C5XTC9
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Position
4:complement(51241672..51245394)
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AA seq
496 aa
AA seq
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MDRARPTAAAAMLLEPKLEDEDVPPLLQQLASPGPPFVSLDQLMPAPAAEPPRPLEALLQ
GPQLPPFLSKTYDLVSEPALDGVISWGAAGNSFVVWDPSTFARDVLPHNFKHNNFSSFVR
QLNTYGFRKVHADRWEFAHEDFLRDSKHLLKRIVRRRSSPTKQSSIQPGSSSGESILDPE
LHTLRREKNTLLEEVARLKQEHRQTIEHMSTLNHRLESAEDRQRQMVSFLAKLLQNPSFV
RQLKLHREKKEIDSTRVKRKFLKHVPHSIESGESSSQHAGESGSHFAVSSSMATSLHDDI
TELQNFLLEDDDVNFGMGSENMGLEGIDAPEDIGELIQGFDTQEELELGSGAELLEMPPA
SGPLGQDPTIGRSKGKNVLCPGLDATSSEADCLSPLSDNMGLLSGTMLGAAGRMMDADDQ
QVWGVDASAALQSSCSGTSQQAFSSHASDPYLMDIANKPERFWELDFQALDETDLQLDKC
AIDDPALQQQPSMEKP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgcccgccccaccgccgccgccgcgatgctgctggagcccaagctcgaggac
gaggacgtgccgccgctgctgcagcagctggcgtccccgggcccccccttcgtgtccctg
gaccagctgatgccggcgccggcggccgagccgccgcgcccgctggaggcgctgctgcag
ggcccgcagctgccgcccttcctgtccaagacgtacgacctggtgagcgagccggcgctg
gacggggtcatctcctggggcgcggccgggaacagcttcgtcgtctgggacccctccacc
ttcgcgcgcgacgtgctgccgcacaacttcaagcacaacaatttctccagcttcgtcagg
cagctcaacacctatggtttccgcaaggttcatgctgacagatgggagtttgctcacgaa
gatttcctgcgagatagcaagcatctgttgaagaggattgtcaggcgcaggtcctcccca
acaaaacaaagcagcattcagcctggttcttcttctggagaatccatcctggaccctgag
ctccacacgctgagaagagagaagaacacgctgcttgaagaagtggcaaggttgaaacag
gaacaccgccagacaattgagcacatgagcacgctgaatcacaggctggaatctgcagag
gaccggcagaggcagatggtctctttcctggccaagctccttcagaacccgagtttcgtg
aggcagctgaagctgcacagggagaagaaagagattgactccaccagggtgaaaaggaag
tttctgaagcatgttcctcatagcatagagtcaggtgagtccagctcacagcatgccgga
gagagtggttcgcatttcgctgtgagttcttccatggctacaagcctgcacgacgacatc
acagaacttcagaattttctcttggaagacgatgacgtcaactttggcatgggttcagaa
aacatggggcttgaaggcatcgatgcaccagaggatattggagaattgattcaggggttc
gacacgcaagaagaacttgagctgggcagtggagctgagctactggagatgcctccagct
tctggtcctctgggtcaagatcccacaatcggcaggtccaagggaaagaatgtgctgtgt
ccaggtttggacgctacctcttctgaagccgactgcctcagtccattgtctgacaacatg
gggttgctttcaggcaccatgctaggggcagcaggcaggatgatggacgctgatgatcag
caagtgtggggcgttgatgcctcagcagccctgcaaagctcttgcagtggcactagtcaa
caagctttcagtagccatgctagtgatccctatctgatggacattgccaacaagcctgag
agattctgggagcttgatttccaggcactggatgaaactgatctgcagctggacaagtgt
gctattgatgaccctgctcttcagcagcagccaagtatggagaagccgtag
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