Sorghum bicolor (sorghum): 8059664
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Entry
8059664 CDS
T01086
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8059664
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
8059664
Transfer RNA biogenesis [BR:
sbi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
8059664
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-GeneID:
8059664
NCBI-ProteinID:
XP_021312220
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Position
3:complement(67139674..67147169)
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AA seq
797 aa
AA seq
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MGPSPMVARAAGGCSTAALAFFRLHPLRRAVRPAAAFSGGCSSGLHGGCRSRLAHSIVDS
VLDELRYRRRVRVSAKIGLQGTKELPDNKIDKRTLQKGLLLEFQKDSERSLLAVVERPDG
KKNWMVTDQVLFEWIAITCPVDYPNGILSSIKPQQVTYVVPGIMNFDYSRIDEFLEKTQD
LLDPTVLECAWMELSEKDKSITVEEFAEIVYGTKESLESYCAHLLLSRDVVYFVKVESRD
YSMYQPRSPAQVEELLRRKLAKEAAEKELEEFVHLLKSAKELPVESKPPKTSWLGEEKVR
QKIEALQAYAVDACDDEQRRLAGNILKAMGFTRTSSAALKLLINVGYFPVHVNLDLFRYD
VRIRYTDEVLSAAEELLVDSPDADMHIRKDLSTLKVYAIDVDEADELDDALSATRLPDGR
IKVWIHVADPTCLVKPRSIIDREAMHRGTSIFLPTATIPMFPERLAMNAMSLQQGKECKS
VTVSVILNSDGSIAEYTLENSVIKPTYMLTYESATELLYMNLEEEEELRILQEAASIRAQ
WRHSQGSIDTAMIEPRIKVSNPDDPEPNINLYVEDQANPAMQLVSEMMILCGEAVAAFGS
DNNLPLPYRGHPQSNTAVSVFSHLPEGPARSFANISVLRAAEMDFQKPVPHGVLGIPGYV
QFTSPIRRYVDLLAHYQVKAFLRGDSPPYSAGDLEGMTFIASMHVKVARRLHSNSLRYWL
LEYLRRQPKGRKYRALILKFIKDRMGALLLVEVGMQITTTISRGKVGDEVSVTVETAHPR
DDILSVREVVEDTEDSE
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggggccctcgcccatggtggcgcgggcagcgggcggctgctccacggcggcgctcgcc
ttcttccgcctccaccccctccgacgcgccgtccgcccagccgccgctttctctggaggg
tgctcctctggcctccacggcggctgccggagccgcctggcgcatagtattgtggactcc
gttctggatgagctccgctaccgccggcgcgtccgggtctcggcaaagataggattgcag
ggcacaaaggaattgcctgacaataagatagacaagagaactttacagaaaggattgctg
cttgaatttcagaaagattccgagagatctttgcttgctgttgttgaaaggcctgatgga
aagaaaaactggatggtgactgatcaggtcctttttgagtggatagctataacttgtcca
gtagattatccaaatggtatcttgtcttcgataaagccccaacaggttacatatgttgta
cctggcatcatgaattttgactattcaagaatagatgagtttcttgagaaaacgcaagat
cttttggacccaactgttttggaatgtgcttggatggagctgtctgagaaggataaatca
ataacagttgaggaatttgcagagatagtgtatggtaccaaggagtctctggaaagctac
tgtgcacatctcttattatcaagggatgtagtatattttgtgaaggtagagagcagagat
tactccatgtaccaacctcgttcacctgctcaggtagaggaactcctacggcggaagctt
gctaaagaggcagctgagaaggaattggaagaatttgtccacttactcaagtctgccaaa
gaattgcctgtggagtccaagcctcctaaaacgtcatggttgggggaagaaaaagtcagg
caaaaaattgaggctcttcaagcatatgcagttgatgcatgtgacgacgaacaaagaaga
ctagcaggaaatattctcaaagctatgggattcacaaggacatcatcagctgctctaaag
ctccttataaatgttggatacttccctgtgcatgtcaatctcgaccttttcaggtatgat
gtccgtataaggtacacggatgaagttttgtcagctgcagaggagcttctggtggacagc
cctgatgcagacatgcatatcaggaaggatctttcgactttgaaagtgtacgccattgat
gtggacgaggctgatgaacttgatgatgcattgagcgcaactaggcttcctgatggtagg
ataaaggtctggatacatgttgctgacccaacatgcttggtcaaacctcgtagcatcatt
gatagggaggcaatgcacagaggaacctcaatctttctaccaactgctaccattccgatg
ttcccagagaggcttgccatgaatgctatgagcttgcagcagggtaaagaatgcaaatct
gtaactgtatctgttattttaaactcagatgggagtattgcagaatatactctagagaac
tcagtcatcaaacctacctatatgttgacatatgagagtgcaactgaattgctttacatg
aacctggaagaagaggaagaactaaggattcttcaagaagctgcttccattcgtgctcag
tggcgtcatagccagggttcaatagacactgcgatgatagagccacgtatcaaggtgtca
aatcctgatgatcctgaaccaaatatcaatctatatgttgaagatcaagccaatccagca
atgcagcttgtatctgaaatgatgatactttgtggcgaggcagtggctgcttttggttct
gacaacaacctccctttgccatatagaggtcatccccagtccaacacagcagtgtcagtg
ttctctcatctacctgaggggcctgcaaggagctttgccaatatcagtgtgctccgtgct
gcagaaatggattttcaaaaacctgtaccacatggtgtacttggtattcctggttacgtg
cagttcacctctcctattcgaagatatgttgatctgctagctcattatcaggtaaaagct
tttcttagaggtgattctccaccatattcagctggtgatctagaaggaatgacatttatt
gcgagcatgcatgttaaagtagctaggaggcttcatagcaacagcttgcggtactggctg
ttggaatacttgaggcgacaaccaaaggggaggaagtacagagcactgattctgaagttt
atcaaggatcgtatgggagctctgcttttggtggaggttgggatgcaaattacaacgaca
atttcacgtgggaaagtgggagatgaagttagtgttactgtggaaacagctcatccacgt
gacgatatcttatcagtcagagaggttgtagaggacaccgaggattctgagtaa
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