Sorghum bicolor (sorghum): 8059673
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Entry
8059673 CDS
T01086
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
sbi03015
mRNA surveillance pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8059673
09122 Translation
03013 Nucleocytoplasmic transport
8059673
03015 mRNA surveillance pathway
8059673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8059673
03041 Spliceosome [BR:
sbi03041
]
8059673
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
8059673
Spliceosome [BR:
sbi03041
]
Common components
Common spliceosomal components
Cap binding complex
8059673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
8059673
NCBI-ProteinID:
XP_002454163
UniProt:
A0A921UIY6
C5XXC1
LinkDB
All DBs
Position
4:complement(56232809..56236727)
Genome browser
AA seq
242 aa
AA seq
DB search
MASLFKDPSKLSAYRDRRFKGTQEEYEATLLASTTLYIGNMSFYTTEEQAYELFSRAGEI
KKIIMGLDKNSKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKMVQRELEAQRELVDYGGSFQPNAPPPYERGERKRG
YGDSHRNDRGDYQRKRYRNDDRSAPEESKRAPDSDPAEKNPRFREKGDSDEEEDDYDKRR
RR
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccttttcaaggacccgagcaagctttcggcgtacagggaccgtcgattcaag
gggacgcaggaggagtatgaggcgacgctgcttgcgtcgactacgctgtacattgggaac
atgtccttctacaccacggaggagcaagcctacgagctcttctcccgcgccggcgagatc
aagaagatcatcatgggcctcgacaagaactccaagaccccatgcggtttctgcttcgtg
ctgtactactctagagaggatgctgaagatgctgtcaaatacattagtggaacgatgctt
gatgatcgtccaatccgtgttgatttcgattggggctttgaagaaggcaggcaatggggc
cgtggacgaagtggtggacaagtcagagatgagtaccgtacagattatgatcctggaaga
ggtggttatggtaagatggttcagagggaactagaagcacaaagagaattagttgactat
ggtggatcttttcaaccgaatgcaccacctccctatgagagaggtgagcggaagagagga
tacggagattctcataggaatgacagaggagattaccagcggaaacgctatcggaacgac
gaccggtcggcaccagaggagtccaagagagcaccagactctgatccagcggagaagaat
cccagattccgtgagaaaggtgactctgatgaagaagaggatgactacgacaagagacgt
cgtcgctag
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