Sorghum bicolor (sorghum): 8059688
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Entry
8059688 CDS
T01086
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8059688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8059688
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8059688
Enzymes [BR:
sbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
8059688
Messenger RNA biogenesis [BR:
sbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
8059688
Transfer RNA biogenesis [BR:
sbi03016
]
Prokaryotic type
tRNA degradation factors
8059688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
S1_RRP5
CvfB_2nd
KH_1
Urease_gamma
Motif
Other DBs
NCBI-GeneID:
8059688
NCBI-ProteinID:
XP_002454178
UniProt:
A0A921R643
C5XXP5
LinkDB
All DBs
Position
4:complement(56570424..56577970)
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AA seq
983 aa
AA seq
DB search
MSMAVASSLRSLARRRPRLRLPAAPLVVPGGRAALLSGAAEEAAPLAAAEAAAAAAPPVP
GRKVLESFREEFEIGGRSIAFETGKMARFANGSVVISMEDTHVLSTVAAAKSSEPVRDFL
PLTVDYQEKQYAQGVIPTTYMRREGAPKERELLCGRIIDRPIRPLFPPGFYHEVQIMVNV
LSSDGKQDPDVMAANASSAALMLSDIPWNGPIGVIRVGRIDGNFILNPTVDELGSSDLNL
IYACSRDKTLMIDVQAREITERDLQAGMKLAHSEAIKCIDPQIRLAKRAGKEKKEYKISL
ISDTSYEKIRTFSEAPIEEVFTDSSYGKFERGEALEKITQTVKAKLEEENDEDSLKFLHK
AVDTVRKQVIRKRIIEEGLRVDGRQLDEVRPLYCESNTYPVLHGSALFSRGDTQVLCTVT
LGAPGDAQRLDSIVGPPTKRFMLHYSFPPFSINEVAKRGGLNRREVGHGTLAEKALLAVL
PPESDFPYAVRVNSEVMASDGSTSMASVCGGSMALMDAGIPVREHVAGVSVGLVSQVDPA
TGDISNYRILTDILGLEDHLGDMDFKIAGTRKGITAIQLDIKPAGIPLDIICESLEPARK
ARNQILDRMDQEISTARAINDGSSPRLATLSFSSDSLRKLLFHRKKIEQETGARVSVSDG
TVTIVAKTQEIMDKAIEKVEFLVGREIEVGRTYKGIVSSIKEYGAFVEFNGGQQGLLHIS
ELSHEPVAKVSDVVTVGQSLSLRCIGQDVRGNIKLSLKATLPQPRSKKDLKTKDPLPSEV
SGWTAVENMISVDVDAEASSTEHENGTTEEAPAFSTPSVIIRSAADCDAQDDANGPKKRA
KAAKSSPRPYKPASEGHEVRKATAKKSTSATTKKTKKIKIEESGSNGLQTSGSDVPEKTA
DNTLDLNQSPTNFQSGAMKLGDVVTAKVYQIRAFGLVLELSDGARGMHKFEANGQKEFEV
GQELLVKCSSFNAKGIPVFSLLD
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggcggtggcctcctccctccgctccctggcgcgccgccgaccccgcctgcgc
ttgcccgctgcgccgctcgtcgtccccggcggccgcgcggcattactctccggcgcggcc
gaggaggcggccccgctggctgccgcggaagcggctgcggcggcggcgccgcctgtcccg
ggtcggaaggtgctggagagcttccgggaggagttcgagatcggggggcgctccatcgcc
ttcgagacgggaaagatggcgcgcttcgccaacggctccgtggtgatctccatggaagac
acccatgtcctctcaaccgtcgccgccgccaagtcctctgagcccgttcgggacttcctc
ccactaactgttgattatcaagagaaacaatatgctcaaggtgttatccccacaacatat
atgcgcagggaaggtgctcctaaggaaagagaactcctgtgtgggcgtataattgataga
ccaataagaccattgtttcctcctggcttttaccatgaagttcagatcatggtaaatgtt
ctttcatcagatggtaagcaagatccagatgtaatggctgcaaatgcctcttcagctgca
ctaatgctatctgatataccttggaatgggccgattggagtaatacgtgtagggagaatt
gatgggaatttcatcttaaatcctacagtggatgagctaggttcgagtgatctcaatctt
atttatgcatgttcacgggataaaacgttaatgatagatgtacaagctcgtgaaataact
gagagggatcttcaggcaggcatgaagcttgcacactctgaggcaattaaatgtatcgac
cctcaaataaggttggctaagcgagctggcaaagagaagaaagaatacaagatatcactg
atttcagatacatcctatgagaaaattagaacattctcagaagcacccattgaggaagtc
ttcactgattcatcatatggcaagtttgaacggggggaagctttagaaaaaatcacacaa
actgttaaggcaaagcttgaagaagaaaatgatgaggacagcttgaagtttcttcataag
gcagttgacacagtgagaaaacaggttatacgtaaaagaataattgaagagggacttaga
gtagatggtagacaacttgatgaagtgagaccattgtattgtgaatccaacacatatcca
gtattacatggctctgccctgttttcacgtggagacacacaggttctttgtacagttacc
cttggtgctcctggcgatgctcagcggctggattcaattgttggccctccaacaaagcgt
ttcatgcttcactatagttttccaccattttcgataaatgaagttgccaaacgtggaggc
ctgaatcggcgagaagttggacatggcactcttgcagagaaagcactgcttgctgtgctt
cctccagaaagtgattttccatatgccgttcgggtaaattcagaagtcatggcatctgat
ggttcaacatcaatggcatcagtatgtggaggaagtatggccttaatggatgctgggata
cctgtaagagaacatgttgctggtgtttcagtgggtcttgtaagtcaggtggacccagct
actggagatatttctaattatcgcatattaacggatattctgggccttgaggatcacttg
ggtgacatggacttcaaaattgcagggacaaggaaaggtattactgctattcagctggat
ataaaacctgccggaataccattggacataatatgtgaaagtttagagcctgcacgtaag
gctcgaaatcaaatccttgaccgcatggaccaggaaataagtactgcacgtgctattaac
gatggaagttcccctcgattagctacactgagcttcagcagtgattctcttaggaaactg
cttttccacaggaaaaaaattgagcaagaaacaggtgcacgagtatcagtcagtgatggt
acagtcactattgttgctaaaactcaagaaattatggataaagctattgagaaggttgag
ttcctcgtgggacgtgaaattgaagttggtcgtacatacaaaggaattgtttcctcaatc
aaggagtatggtgcttttgtggagttcaatggtggacagcaaggcttacttcacatttca
gagttgtcacatgaaccggtagcgaaagtctcagatgttgtaactgttggccaatctctc
tctctcagatgtattggacaggatgtgcggggtaacattaaactttcacttaaagcaact
ttaccccaaccacgtagcaagaaggatttgaaaactaaggatcctttgccaagtgaagtt
agcggttggactgctgtagagaacatgattagtgtggatgttgatgctgaggcatccagt
accgaacatgaaaatggcacaactgaggaggcacctgcgttttcgactccttcagttata
attcgaagtgctgctgattgtgatgctcaagatgatgcaaatggtcctaagaagcgggcg
aaggctgcaaagtcatctcctagaccatataaaccagccagcgaaggtcatgaggttagg
aaagctactgctaagaaatccacaagtgctactacaaagaaaactaagaaaataaagatt
gaggaatctgggagtaatggactgcaaaccagtggttctgatgttccagaaaagactgct
gacaacactttggacctgaatcagagtcccacgaacttccagtctggggcaatgaagtta
ggtgatgtagttacggcaaaggtctaccagattcgagcctttggactagtacttgagttg
agtgatggtgcgcgtggaatgcataaatttgaggcaaatggccaaaaggaattcgaagtt
ggacaggaactactagtgaaatgctctagtttcaacgctaaggggattccggtattctca
ttgctggactag
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