Sorghum bicolor (sorghum): 8059801
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Entry
8059801 CDS
T01086
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03030
DNA replication
sbi03410
Base excision repair
sbi03420
Nucleotide excision repair
sbi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
8059801
03410 Base excision repair
8059801
03420 Nucleotide excision repair
8059801
03430 Mismatch repair
8059801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbi03032
]
8059801
03036 Chromosome and associated proteins [BR:
sbi03036
]
8059801
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8059801
DNA replication proteins [BR:
sbi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
8059801
DNA Replication Termination Factors
ELG1-RFC complex
8059801
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
8059801
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
8059801
Check point factors
HRAD17(Rad24)-RFC complex
8059801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_16
AAA_14
AAA_24
AAA_11
AAA_assoc_2
ResIII
AAA_5
SLFN-g3_helicase
PhoH
nSTAND3
AAA_2
AAA_19
AAA_25
AAA_30
DNAX_ATPase_lid
AAA_23
AAA_28
AAA_7
IstB_IS21
DUF3853
RNA_helicase
Cdc6_lid
Gp44_lid
bpMoxR
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
8059801
NCBI-ProteinID:
XP_002468414
UniProt:
A0A921S6H0
C5WVW1
LinkDB
All DBs
Position
1:complement(75708143..75711320)
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLVPMSQPWVEKYRPRQVKDVAHQEEVIRVLTNTLQTADLPHMLFYGPPGTGKTTTAL
AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTARKAGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSS
RIMHICNEEGLNLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSLSSSDLISVSGVIP
EDVVKSLLAACKSGEFDVANKEVSNIIADGYPVSQLMAQFLDVIVSADDIQDDQKARICK
KLGETDKCLVDGADEYLQLLDVASETIRALFNMPQTLVF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctcgtgccgatgtcgcagccatgggtggagaaataccggccgaggcaggtc
aaggatgtggctcaccaggaggaggtgattcgggtgctcaccaacaccctccagaccgcc
gacctgccgcacatgctgttctacggcccgccggggacgggaaagaccaccaccgcactc
gccattgcctaccagctctacggtccagagctatataagtcgagagttttggagctcaat
gctagtgatgatcgtggaattaatgtggtgaggacgaaaatcaaggactttgctgctgtt
gctgttggtactgcacggaaagctggttatccctgcccaccttacaagattattatactt
gatgaagcagattcaatgacagaagatgcccagaatgctttgaggcgtaccatggagact
tactccaaagtgacccgattcttttttatatgcaactatatcagcaggataatagaacca
cttgcatcgagatgtgccaagtttaggttcaagcctctttcagaagaagtgatgagcagc
cgcattatgcatatatgcaatgaagaaggtctcaatcttgatgctcaggcgctgtccacg
ctgagtgccatttctcaaggtgaccttcgtcgtgctataacctatcttcagagtgcagct
cgcttatttggatcttctctctcttccagtgacttgatcagtgtttcaggggttatccct
gaagatgttgtcaagtcactgcttgcagcctgcaaatctggtgaatttgacgtggcgaac
aaggaagttagcaacattattgcagatggatatccagtctcacagctgatggcgcagttt
ctagatgtgattgttagcgcggatgatattcaagatgatcaaaaggcaaggatatgtaaa
aagcttggggaaactgacaagtgcttggttgatggggcagatgagtatctacagctgttg
gatgtcgccagtgagactattcgtgctcttttcaacatgccacaaacgctggtcttctaa
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