Sorghum bicolor (sorghum): 8059807
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Entry
8059807 CDS
T01086
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8059807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8059807
03036 Chromosome and associated proteins [BR:
sbi03036
]
8059807
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8059807
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
8059807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
8059807
NCBI-ProteinID:
XP_002468420
UniProt:
C5WVX6
A0A921S8Q5
LinkDB
All DBs
Position
1:complement(75797427..75802651)
Genome browser
AA seq
1007 aa
AA seq
DB search
MAARTVFPVLRSSEYFTRPSIDELVEREVANPGYCSRVPNFIIGRAGYGQVRFLGDTDVR
GIDLNEIVRFEKHYVVVYEDETCKPPVGHGLNKAAEVSLLLSLKDLPEPSILVEVLRCRA
RKQGSRFLSFNPVNGKWKFEVDHFSRFGLVDEEEEDAVMDEAAVRQPITEVRERDPPSNG
HEIELSHSLPAHLGLDPAKMQEMRMVMFSNEEEDEYMEDDGFPSDERYVSRERMNVDSPT
SSGKGLRLRSLSPLHMSSQKSGRRSGMPVRKEPQALLEYSMNSSELGPSTQGILMSGQNR
GFPVSMTKVDGFKLPADQETPVAGNMYTNCVVDAALFMGRSFRVGWGPNGLLVHSGSLVN
NPGTGLSSVIHIEKVASDKLVRDDKSKIKDDLTELCFSDPMGLHKSLDHEILETESDSFR
LKLQKVMANRLVLPDICRSYIDIIEKQLEVSDLSMSTRVLLMHQVTVWELIRVLFSERAT
GNQLEPVGDDDQEGMVLDKKEGYVDIDPEALPLFRRADFSNWLQDSVCHRVQGEVGSLND
ARYLEHILLLLTGRQLDTATEIAVSRGDVRLAILLSQAGGSMSNRSDLAQTLDQWKMNGL
DFDYIEEDWLKVYRLLAGNVQAAFLDSPIDWKRYLGLIMWYQLSPETPLDIIIRSYDQLL
GEGKVPYPVPVYIDEGPLDEAPQWSPGDHFDISFYLMLLHANQGEKFGLLKTMFSAFSSS
FDPLDYHMIWHQRSILEAVGAFSSNDLHLLDLSFVYQLLCLGKCHWAIYVILHMPYLDDA
PYIHEKLIREVLSQYCESWSRDDAQRQYIVELGIPEEWMHEALALYHEYYGDKQGALENF
IQCGNWKKAHTIFMTSVAHSMFLSSNHQEVWKITSSLENHKSEIADWDLGAGIYIDFYVL
KNSMQERNAMDDSDSLEEISESCRNFFGRLNDSLLVWGSKLPVESRACYSKMAEELCALL
VDTPSETLNLPMGCLQTMLNAPVPDEIRSSYLQDALSVFTEILCSDS
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggcagctagaactgtattccccgtgctgcgctcctctgagtacttcacaaggccatca
attgatgagctggtagagagggaggtggctaatcctggatactgcagcagggttccaaac
ttcatcatagggagggctggatatgggcaggttaggttcttgggcgacaccgatgtgagg
ggcattgacctgaatgaaattgtcaggtttgaaaaacactatgtggtggtttatgaggat
gagacttgtaagccacctgtagggcatggtcttaacaaagcagcagaagtgtccttgctg
ctgagtttgaaggatcttccggagcccagtatccttgttgaggtgctaaggtgtcgtgca
agaaagcaaggttctaggtttctttcattcaatccagtgaatggaaaatggaaatttgag
gttgatcattttagtagatttgggcttgtggatgaggaggaagaggatgctgtgatggac
gaggcagctgttcggcagccaattactgaagtaagagaaagagacccaccttcaaatggt
catgaaattgagctttcccattcattgcctgctcatctcgggcttgaccctgcaaagatg
caagaaatgaggatggtgatgttttccaatgaggaagaagatgaatatatggaggatgat
gggttcccttctgacgagaggtacgttagcagagaaaggatgaatgtggattcacctacc
tcaagcggtaaaggtttgaggttaaggtctctctctcccttgcacatgtcttctcagaag
tctggcaggagatctggtatgccggttcggaaagaacctcaggcacttttggaatacagt
atgaattcttcagagcttggtccatcgactcagggtattcttatgtctgggcaaaacaga
ggatttccagtgagtatgaccaaggtggatggttttaagctgccggctgaccaagaaact
cctgttgctggaaacatgtatactaattgtgtagtggatgctgctttattcatgggtaga
tcatttcgtgttggttggggaccaaatggtttacttgtacattcaggtagtctggtcaat
aatcctggaacaggcttatcttctgttattcacatagagaaagttgcaagtgacaaactt
gtgcgtgatgataagagcaagattaaggatgacctaacagaactatgtttttctgatcca
atgggcctccataagagtcttgatcatgagattctggagacggagtctgactcgttcaga
ttaaagcttcagaaagtcatggcaaatcgtttggttttgcctgacatctgcaggtcatat
attgacatcattgaaaagcagcttgaagtcagtgatttatctatgtctacgcgtgtgctg
ttgatgcaccaagtaacagtgtgggagttaatcagggtcttgttctcagaaagagcaact
ggtaaccagttggagcctgttggagatgatgatcaggaaggcatggttttagacaaaaaa
gaaggctatgtcgacatagatcctgaagcacttcctttgtttaggagagcagactttagc
aattggttacaggacagtgtttgccatcgggtgcaaggtgaggtgggctccttaaatgat
gccaggtacttggaacatatccttcttcttttgactggtcgacaattggacacagccaca
gaaattgctgtctcaaggggtgatgttcggttggcaatcttgctaagtcaggcaggtggg
tcaatgtcaaatcgatctgaccttgctcagacactggatcagtggaaaatgaatggtcta
gattttgattatattgaggaagactggttaaaggtatataggttgcttgctggtaacgta
caggctgcttttctagattcaccaattgactggaaaaggtaccttggtttgattatgtgg
tatcaattatcacctgaaacaccacttgatattatcattcgttcttatgatcaactcctt
ggtgagggcaaagttccctatcctgttcctgtatatatagatgaaggacctcttgatgaa
gcgcctcagtggtccccaggtgaccattttgatatctccttctacctaatgcttcttcat
gccaatcaaggcgagaagtttgggctgctaaaaactatgttcagtgcattctcatcttca
ttcgaccccttggattatcatatgatatggcatcagcgttcgattttggaagctgttggt
gctttcagttcaaatgatcttcacctgctagatttaagttttgtttatcaattactttgt
cttgggaagtgccattgggctatctatgtcattctacacatgccgtatcttgacgatgcc
ccatacattcatgaaaaattaatcagggaagttttatcacagtattgtgagtcatggagt
agagatgatgctcaaaggcaatatattgtggaacttggtataccagaagaatggatgcat
gaagctctggctctttatcacgaatactatggagataagcagggtgcactggagaatttt
attcagtgtggcaactggaagaaagctcatactattttcatgacttctgttgctcattct
atgtttctgtcatctaaccatcaggaggtctggaagatcacaagttccttggagaaccat
aagtctgaaattgctgactgggaccttggtgccggcatatacatagacttctacgttcta
aagaactcaatgcaagaaagaaatgccatggatgattcggattcactcgaggagataagt
gaatcatgcagaaatttctttggccgattaaatgattcattgttagtctggggaagcaaa
ttacctgttgagtcaagggcatgctactcgaagatggcagaggagctatgcgcgcttctc
gtggacaccccaagcgagacactgaatctacccatgggatgtcttcagacaatgctcaac
gctccagttcctgatgaaatcaggtcgtcgtacctgcaggatgcactctccgtcttcacc
gaaattctttgcagcgattcatag
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integrated database retrieval system
