KEGG   Sorghum bicolor (sorghum): 8060450
Entry
8060450           CDS       T01086                                 
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
  KO
K10663  E3 ubiquitin-protein ligase ATL4 [EC:2.3.2.27]
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sbi04121]
    8060450
Enzymes [BR:sbi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     8060450
Ubiquitin system [BR:sbi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    8060450
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-ANAPC11 zf-RING_5 zf-RING_16 zf-C3HC4_3 zf-RING-like zf-RING_Vps41 YjbE zf-C3H2C3 Prok-RING_1
Other DBs
NCBI-GeneID: 8060450
NCBI-ProteinID: XP_002447001
LinkDB
Position
6:54782231..54784125
AA seq 398 aa
MSSSSSSSSSLSLQPPPAGAIGGTSPYSASTSFLPSFMIIAALLAFVFLASVSIHLLLRF
LSDRSSSSSSSGPPLPRTHRDEAGSAGSTMDASSAARPAATAAAPADAAKKEAAAGDDEK
QRLIDSLPLFTMASSLAALPKSSPDCAVCLSPFTPDAELRLLPACRHAFHAACVDAWLRT
TPSCPLCRAAVVAFPHPSLSAMLAAAQQQRPASPRTRDPRSGSSFLVEMGTVSSSRGSPV
AAGGGGGDRNRNSRTYSLGSFDYQIDEEVEAVVSRVARITARESSTVKEEMEKPSGEEVS
ARPPAPAPSPPPPGETVAEAAGSSRGWLREYVDRLASSAYTLSERWSSRWSQGQSQQQRQ
EEPWLWDTEAADMSAAPGSDEEEEETAFMVMYRWIAGV
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgtcctcctcctcctcctcctcctcctccctgtctctacagccgcctcccgccggtgca
atcggcggcacttccccctactccgcgtccacgtctttcctcccctcgttcatgatcatc
gccgcgctgctcgccttcgtgttcctcgcctccgtctccatccacctcctgctccgcttc
ctctccgaccgctcctcctcgtcgtcgtcgtctggacctccgctcccgcggacccaccgc
gacgaagcgggctcggcggggagtacgatggacgcgtcgtccgcggcgaggcctgccgct
accgcggctgctccagccgacgcagcgaagaaggaggcggcggcgggcgacgacgagaag
cagcggctgatcgactcgctgccgctgttcacgatggcgtcgtcgctggcggcgctcccc
aagagctcgcccgactgcgccgtctgcctgtcgccgttcacgcccgacgccgagctgcgg
ctgctgcccgcgtgccgccacgcgttccacgccgcgtgcgtcgacgcctggctgcgcacc
acgccgtcctgcccgctctgccgcgccgccgtcgtcgcgttcccgcacccctcgctctcc
gccatgctcgccgccgcgcagcagcagcggccggcgtcgccgaggaccagggacccgcgg
tccgggtcgagcttcctcgtcgagatgggcaccgtcagcagcagccgcggctcgcccgtg
gcggccggcggcggtggcggggacaggaacaggaacagccgcacctactcgctcggctct
ttcgactaccaaatcgacgaggaggtggaagccgtggtgtcccgcgtcgcgcgcatcacc
gcgagggaatccagcaccgtcaaggaggagatggagaagccttcgggtgaagaggtgtcg
gcacggccgccggcgccggcgccgtctccgccgcctccaggcgagacggtggccgaggcg
gcgggctcctcgcgcgggtggctgcgggagtacgtggaccggctggcgtcgtccgcctac
acgttgtcggagcggtggagctcccgctggagccaggggcagagccagcagcagcggcag
gaagagccgtggctgtgggacacggaggccgcggacatgtcggcggcgccggggtccgac
gaggaggaggaggagacggcgttcatggtgatgtaccgctggatcgccggggtgtaa

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