Sorghum bicolor (sorghum): 8060450
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Entry
8060450 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8060450
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8060450
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
8060450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_3
zf-RING-like
zf-RING_Vps41
YjbE
zf-C3H2C3
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
8060450
NCBI-ProteinID:
XP_002447001
LinkDB
All DBs
Position
6:54782231..54784125
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AA seq
398 aa
AA seq
DB search
MSSSSSSSSSLSLQPPPAGAIGGTSPYSASTSFLPSFMIIAALLAFVFLASVSIHLLLRF
LSDRSSSSSSSGPPLPRTHRDEAGSAGSTMDASSAARPAATAAAPADAAKKEAAAGDDEK
QRLIDSLPLFTMASSLAALPKSSPDCAVCLSPFTPDAELRLLPACRHAFHAACVDAWLRT
TPSCPLCRAAVVAFPHPSLSAMLAAAQQQRPASPRTRDPRSGSSFLVEMGTVSSSRGSPV
AAGGGGGDRNRNSRTYSLGSFDYQIDEEVEAVVSRVARITARESSTVKEEMEKPSGEEVS
ARPPAPAPSPPPPGETVAEAAGSSRGWLREYVDRLASSAYTLSERWSSRWSQGQSQQQRQ
EEPWLWDTEAADMSAAPGSDEEEEETAFMVMYRWIAGV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcctcctcctcctcctcctccctgtctctacagccgcctcccgccggtgca
atcggcggcacttccccctactccgcgtccacgtctttcctcccctcgttcatgatcatc
gccgcgctgctcgccttcgtgttcctcgcctccgtctccatccacctcctgctccgcttc
ctctccgaccgctcctcctcgtcgtcgtcgtctggacctccgctcccgcggacccaccgc
gacgaagcgggctcggcggggagtacgatggacgcgtcgtccgcggcgaggcctgccgct
accgcggctgctccagccgacgcagcgaagaaggaggcggcggcgggcgacgacgagaag
cagcggctgatcgactcgctgccgctgttcacgatggcgtcgtcgctggcggcgctcccc
aagagctcgcccgactgcgccgtctgcctgtcgccgttcacgcccgacgccgagctgcgg
ctgctgcccgcgtgccgccacgcgttccacgccgcgtgcgtcgacgcctggctgcgcacc
acgccgtcctgcccgctctgccgcgccgccgtcgtcgcgttcccgcacccctcgctctcc
gccatgctcgccgccgcgcagcagcagcggccggcgtcgccgaggaccagggacccgcgg
tccgggtcgagcttcctcgtcgagatgggcaccgtcagcagcagccgcggctcgcccgtg
gcggccggcggcggtggcggggacaggaacaggaacagccgcacctactcgctcggctct
ttcgactaccaaatcgacgaggaggtggaagccgtggtgtcccgcgtcgcgcgcatcacc
gcgagggaatccagcaccgtcaaggaggagatggagaagccttcgggtgaagaggtgtcg
gcacggccgccggcgccggcgccgtctccgccgcctccaggcgagacggtggccgaggcg
gcgggctcctcgcgcgggtggctgcgggagtacgtggaccggctggcgtcgtccgcctac
acgttgtcggagcggtggagctcccgctggagccaggggcagagccagcagcagcggcag
gaagagccgtggctgtgggacacggaggccgcggacatgtcggcggcgccggggtccgac
gaggaggaggaggagacggcgttcatggtgatgtaccgctggatcgccggggtgtaa
DBGET
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