Sorghum bicolor (sorghum): 8060478
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Entry
8060478 CDS
T01086
Name
(RefSeq) tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4
KO
K15443
tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8060478
Transfer RNA biogenesis [BR:
sbi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
8060478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
EIF3I
WDR55
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
Beta-prop_EML
NBCH_WD40
Ge1_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
8060478
NCBI-ProteinID:
XP_002463884
UniProt:
A0A921RWS1
C5X165
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Position
1:7105006..7108439
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AA seq
434 aa
AA seq
DB search
MEDTAVEEPEVSGAAEFAPALVAAHPQGNSVAVAIGPELRAFDLSAGLPVSLSDDCGGRS
HSDAIRAICFSVSGALFASAGDDKLVKVWKTDSWRCIQTITSEKRVSAVAISNDDLYVTF
ADKFGVVWLVTLREDSAEQVSVDNKPVSILGHYCSIITSMKFSPDGRFIATADRDFKIRV
TLFPKNPLKGAHEIQSFCLGHTDFVSCITFTSISETQSFLVSGGGDSTVRLWDYVNGCLL
DTFQVRDKMGELLGPNEADDSSLAIADICPSIDGSLVAVAIQSFSGVMLLACDLVGKKLS
FLKVITMEKSYIPTSLASSLSSELLWTVMGASNMPNQASSHLLTRLRIIPCFQKDRLSSS
DAGPATLEDGEVPHGEKLLLALQGSLDVTKQEEVLASVLAALKVSMHKMLVKKHYSEERR
EQRKRGRNDKKIKN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaggacacagcggtcgaagagcccgaggtgagcggcgccgcggagttcgcgccggcg
ctcgtcgctgcccacccacaaggcaactccgtcgccgtcgctattgggcccgagctccgc
gcgttcgatctcagtgctggtctgccagtttcattgtcagatgattgtggtggccgttct
cattcagatgctataagagctatttgcttcagtgtgagtggagctttgtttgcatctgct
ggtgacgacaaacttgtgaaggtttggaagactgattcatggcgttgcatccagactata
acttcggagaagagggtcagtgcagttgctattagcaacgatgacctgtatgtaactttt
gctgataaatttggtgttgtttggttagtcactttgcgggaagatagtgcagagcaggtt
tcagttgataacaaacctgtgtcaattcttggtcactattgcagtatcatcactagcatg
aagttttcgccagatggacggttcattgctactgctgacagggacttcaaaatacgagtc
acattattcccaaagaatcctctaaaaggggcccatgaaatacagagcttttgccttggg
catacagactttgtgtcatgcatcaccttcactagcatatctgaaacccagagctttctt
gtatcaggaggaggtgattcaactgttcgcctgtgggactatgtaaatggatgtctcctt
gatacatttcaagtcagagataagatgggagaactcttaggaccaaatgaagcagatgat
agcagtctagccattgcagatatatgtccgagtattgatggctcattggttgctgtagct
attcaaagtttcagtggtgtaatgcttttagcatgtgatttagtaggaaagaagttatct
ttcctaaaggtgattacgatggaaaagagttatattcctactagcttagcatccagcctg
tcctcagaactcctatggactgtcatgggcgcatcaaacatgcccaaccaggcttcctcc
catttattaacccgtttaaggatcataccatgtttccaaaaggacagattatcttcttct
gatgccggtcctgcgacccttgaagacggtgaggtaccacacggtgagaagctccttttg
gcactgcaaggaagcctcgacgtcacaaagcaagaggaggtgttagcttcagtgctggct
gcgctgaaggtttcaatgcataagatgctggtgaagaagcactactcggaagagaggagg
gagcagaggaaaagaggtaggaacgacaagaagatcaagaactag
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