KEGG   Sorghum bicolor (sorghum): 8060653
Entry
8060653           CDS       T01086                                 
Name
(RefSeq) histone deacetylase 5
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sbi03036]
    8060653
Enzymes [BR:sbi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     8060653
Chromosome and associated proteins [BR:sbi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     8060653
SSDB
Motif
Pfam: Hist_deacetyl Aminotran_5
Other DBs
NCBI-GeneID: 8060653
NCBI-ProteinID: XP_002460972
UniProt: C5XDU1 A0A921RTN8
LinkDB
Position
2:72626015..72634000
AA seq 703 aa
MSAPAPAPAPPMAAPRVGLLYDDRMRAHATPDGEEHPENPERLRAIWRKLNAEGVAPRCV
ALKAKEAEDKYIASVHSKSHIKLMKEISSKKYDATRNKIARKFNSIYFNKGSSESAVLAA
GSVIEVAEKVAAGELSSAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNERPDLGIK
KILIVDWDVHHGNGTQKMFYNDPRVLFFSVHRFDYGSFYPAEGDASHCFIGEEGGKGYNI
NVPWEHGKCGDADYIAAWDHVLLPVTKVFDPDIILVSAGFDAALGDPLGGCCITPNGYAL
LLTKLLGFAQGRIVMALEGGYNLRSIANSVCACAKVLLGDKFTFNAPEMQPFESTWSVIQ
AVRNELKTCWPVLSSKLPENVSLRIRPSPSEVNASSDSESDSEDVAELLPTVASVNVIEV
AGDAISEHLSKMKLDDDNLSVKTTSSCSAAEQHLVDSVKVQNNASVVLTKKISDLSLAWR
SDLSRTDVWYASFGSNMWRPRFLCYVQGGKAEGMSIACYGSRDTSSPKGTMWKTVPHRLL
FGRSSTPCWGTGGVAFLNPEINYNEKSYVCMYKITLEQFNDILFQENRLVLKDGKDGNVV
YPDSPLIGSSEIKFISTNKAIHLEPIKDSWYSNVLYLGNEGELPILTMTCPASDIERFKS
GELPLAPPSETYAATLIRGLVEGKQLDADGAANYINACAAKGL
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgtcggcgccggcgccggctccggctcccccaatggccgcgccgcgggtggggttgctg
tacgacgatcggatgcgcgcgcacgcgacgcctgacggggaggaacacccggagaacccc
gagcggctgcgcgccatctggcgcaagctcaacgccgagggcgtcgcgcccaggtgtgtg
gcccttaaggcgaaggaagccgaggacaaatatatagcttctgttcacagcaagagccat
ataaagctgatgaaggagattagctcaaagaagtatgatgccaccaggaacaagattgct
aggaaattcaattccatttacttcaacaagggttcctcggaatctgctgttcttgcagct
ggttctgtcatagaggtagctgagaaagttgctgcaggtgagttaagttctgctattgct
ctagtcagacctccaggccaccatgcagaacatgatgaggcaatgggattttgcctcttc
aacaatgtggcagttgcagctaattatctcttaaacgagaggcctgatttaggtatcaag
aagatattgattgtcgattgggatgttcaccatggaaatggcacgcagaaaatgttctac
aatgatcctcgtgtattgttcttctcagttcacagatttgattatggaagcttctatcct
gctgaaggggatgcttctcattgtttcatcggggaagaaggtggtaaagggtataacatc
aatgttccctgggagcatgggaagtgtggggatgctgattatattgctgcatgggaccat
gtactgcttcctgtcactaaagtttttgatcctgatataatactggtatcggctgggttt
gatgcagcattgggtgatcctctcggtgggtgctgcattacaccaaatggatatgcactg
ctactaacaaagttgttaggatttgctcaaggaaggatagtgatggcccttgaaggaggt
tataaccttaggtccatagcaaattcagtttgtgcttgtgcaaaagttctcttgggagac
aaattcacattcaacgctccagagatgcagccatttgaatctacatggagtgttatacaa
gcggtacgtaatgaattgaagacatgctggcctgttctgagtagcaagctgccagaaaat
gtatcattgaggattaggccttcaccaagcgaggtcaacgcttcctctgattccgaatct
gatagtgaagatgttgctgagctccttcccactgttgcatctgtcaatgttattgaagtt
gctggtgatgctataagtgaacacctctcaaagatgaaacttgatgatgacaacctttca
gtgaagactacctcaagttgctcagcagcagaacagcatctagttgattcagtaaaagta
caaaacaatgcatctgtggtgctgaccaaaaaaatatctgatttatctctcgcttggcga
tcagatttatcaagaactgatgtctggtatgccagttttggttcaaacatgtggagacca
agatttctatgctatgttcaaggagggaaggctgagggtatgagtatagcgtgctacgga
tcacgtgatacaagctcaccaaaaggaaccatgtggaagactgtacctcacaggttgctt
tttggtagatcgtctaccccttgttggggaactggtggtgttgcttttctcaaccctgag
ataaactacaatgagaagtcgtatgtctgcatgtacaaaataacgttggagcagttcaat
gacatcttgtttcaggagaatcgtttagtgctgaaggatggcaaagacgggaacgttgtg
tatcctgactctcctttgattggttcatctgaaatcaagtttatatctacaaacaaagct
attcatcttgaacctattaaggatagctggtactccaatgtactttatcttgggaatgag
ggtgaacttccaattctaactatgacgtgccccgcatcagatattgagaggttcaaatct
ggtgagctgcctttagcacctccatcagagacatatgcggccactctgataaggggacta
gttgaaggaaagcaactggatgcggacggagctgccaactacatcaatgcttgtgctgca
aaaggcctgtga

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