Sorghum bicolor (sorghum): 8060671
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Entry
8060671 CDS
T01086
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8060671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8060671
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
8060671
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-rbx1
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
Prok-RING_4
zf-RING_6
zf-RING_10
zf-Nse
Motif
Other DBs
NCBI-GeneID:
8060671
NCBI-ProteinID:
XP_002461003
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Position
2:72997452..73002228
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AA seq
389 aa
AA seq
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MRAGAPAGDAGPSSGAGAGSSTPARPRRFPGAAQPEIMRAAEKDDSYAAHVTEACRDAFR
HLFGTRVAVAYQNEIKLLGQSLYYLLTTGSGQQTLGEEYCDITQVATLHGLPPTPARRIL
FILYQTTVPYLAERISSRIVARSIALNESQFDDHPESDNSSSDIAQSVTNNGIPSTSLSV
SALSRLRGRVHALWQWVLQKWPSMLPYAQDVIQLAIRTNLMFFYFEGLYYHLPKRAAGIR
YVFIGKPMNQRPRYQILGIFLLIQLCILGAERLRRSNISSIASSINQISSGSYPSSTGRG
IPVLNEDGNIISDIRSGKAADIASHSEASSGKSKCTLCLSTRQNPTATTCGHVFCWNCIM
EWCNEKPECPLCRTPITHSSLICIYHSDF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcaggcgcccccgccggcgatgcgggccccagctccggggccggcgccgggagc
agtacgcccgctcggccacggaggttccccggggcggcgcagccggagatcatgcgggcg
gcggagaaggacgacagctacgcagcccacgtcacagaggcatgccgcgacgcgtttcgg
cacctcttcggtaccagggttgctgttgcttaccagaacgagataaaattgcttggtcag
tccctttactacttgctaacaactggttcaggccagcaaacacttggcgaggaatattgt
gatataactcaggttgctaccttgcatggacttccacctactcctgcaaggcggatccta
ttcattttgtaccaaactactgtgccctatcttgctgaacggatcagctccagaattgtt
gcccgtagtattgcactcaatgaatctcagtttgatgatcatcctgaaagtgataattct
agtagtgacattgcacaatccgtcacaaataatggcattccttcaacaagcttaagtgtt
tctgctctgtcaaggttaagaggccgagttcatgctttgtggcaatgggttcttcagaaa
tggccttcaatgctgccatatgctcaagatgttatacagttggctattcggacaaatcta
atgttcttctattttgaaggattgtattatcatttgccaaagcgagcagctggtattcgc
tatgtattcattggcaagccaatgaatcaaaggcctaggtaccagatcttgggtattttt
ctgttgattcagttgtgtattctcggagctgaaagactccgaagaagtaatatatcgtca
atagctagttccattaatcaaatatcatctggaagctatccatcgtctacaggtcggggc
atccctgttctaaatgaagatggaaatatcatcagcgacatccgcagtggtaaagctgca
gatatagcttctcattcagaggcttccagtggcaagagcaaatgcaccctctgtctcagc
acccggcaaaatcctactgccacaacctgtggacatgttttctgctggaattgcataatg
gagtggtgcaatgagaagcctgagtgccccctatgcagaactccaattacccattcgagt
ttgatttgtatatatcattcagatttctag
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