KEGG   Sorghum bicolor (sorghum): 8060730
Entry
8060730           CDS       T01086                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sbi03036]
    8060730
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8060730
Chromosome and associated proteins [BR:sbi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    8060730
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     8060730
SSDB
Motif
Pfam: MMS19_N MMS19_C
Other DBs
NCBI-GeneID: 8060730
NCBI-ProteinID: XP_021308826
LinkDB
Position
2:4889206..4899688
AA seq 1127 aa
MVRVPPGEWVPHVEAYVDVSRPAAQHSASVDALAALVNKDNLTLFDLVSKMDMYLTTTDH
IVRSRGILLLGEILSRISFKCLDVNTITTLSDFFISRLSDWQAIRGALVGCLALLHRKQG
VGCIVIADVKRLVESFLQNVPVQSLAAADRKLCFEILSCILDRYPEAVKQMDGEQLYGIC
EAIDEEKDPECLMLSFHVVEVVMKLFPDSSGLAAQFAGDVFEILSKYFPVYFTHGVGNGL
DATREDLSRALMHAFCSTQYFEPFVIPLLLDKLSSSLPLAKIDSLKYLDNCIRFYGADRM
VRHASAVWYKLKEVIFDLSSDQLLISEAVNCLKTAIMYTDSSDKDLFINLILLDEDIVNK
IRSVSSVEKSILSSSEDLAQLHALGSVISILAESSTYFCTRVLQEHFVHLVDIVGTKADY
ESQQLNNCNGSSSAPVNYGALYLSVQLLSSCREVAYKDCSSVKLAKESWWLILEKKLEQL
IHLLRSFFTVTSRSMQPLFRQEYVSCAVKGLLTLATFPEQCSPLPANAYEDILLMFTSIV
INKFENVDLWRLSLKALTSIGSSIAEFHASEREVVYYRTVVDKIVPLVESYDTSMPLSLR
LEASYEVGTAGLNYMLRVAKSLEVAVVTNISESEANGRMECAEHVARLFECYSSQVLPWL
LTSGGVNELALSFALRLLDETKDLTVLDRISSQGLLDSLMTGMKLLVGVCTEEQQSLIVQ
KAYSIISSMLSLPMKLMTGRLLAVDELVPSHSVPETALISMFSSIIVGLRPQTPVPDMMV
MINLFTVFLLNGKIPAAYALASIFNKYLHSPEFSRENQLDKILDDILERCFSTVLANSSS
KISHSSAGTSDDVDSSDVFSGNKLSKINILSSLAWIGKGLLMRGDEKVKDISMFLLKILC
SDEILASIPFHQEEPYSGNSSDTSLAISAASAFHVMMSDSEMCLNKKFHARIKPLYKQRF
FSILMPIFLSKIKETTAVTTKLAVYRAFGHIISNAPVPAVITEAHQILLVMVDSLAKLSL
DIEDKDLVYSLLLVFSGMLMDEKGKECILDNIQITISVLTELVSYPHMMVVRETALQCLV
AFSTLPHSKIYPMRRKVVQAAIKALDDKKRAVRQAAVRCRQTWQSFA
NT seq 3384 nt   +upstreamnt  +downstreamnt
atggtgagggtccctcccggcgagtgggtcccccacgtcgaggcctacgtcgacgtctcc
cgccccgccgcgcaacactctgcaagcgtggatgcgcttgctgccctggtgaacaaggac
aacttgaccctcttcgatttggtatccaagatggatatgtatttgacgacaacagaccac
attgtcagatcaagaggaatactgcttctgggggaaatattgtctcgaatttcatttaaa
tgtttagatgtcaatacaattacaacattgtcagacttctttatatcaagattgtcagat
tggcaagcaatacgaggagcccttgttggttgcctggctctattgcataggaaacaaggt
gttggttgtatcgtgattgctgatgtcaaaagactagttgagtctttcttacagaatgtt
ccagtgcagtcacttgcagctgctgaccgcaagctgtgctttgaaattctgagctgcata
ctggatcggtacccagaagctgtaaaacaaatggatggtgaacagctgtatgggatctgt
gaagcaattgatgaagaaaaggatccagagtgcttgatgctttcttttcatgtagtggaa
gttgtcatgaagctgtttccagattcatctggtttggcagcacagtttgcaggggatgtt
tttgagattctgagcaagtattttcctgtctacttcacacatggagtgggtaatggtttg
gatgctacacgggaagacctctctagagcattgatgcatgctttttgttcaactcaatat
tttgagccttttgtcatccctttgcttcttgataagctttcttcttctcttccattggca
aagattgattctttaaaatatttggacaattgcattcgcttctatggagctgatagaatg
gttagacatgcatcagctgtttggtacaagttgaaagaagtgatttttgacctttcttca
gatcagttgctaatatcagaggctgtgaattgtttgaagactgctattatgtatactgat
tcttcagataaagatctttttattaatttgatcttgttggatgaggatattgtgaacaag
attcgctctgtatcaagtgtggagaagtccatattgagttcatcagaggacctggcccaa
ctgcatgcacttggaagtgttatttctattcttgctgaatcatctacatatttctgtact
agagttcttcaagagcactttgttcacttggtagatattgtgggaaccaaagctgactat
gaatctcagcagttgaataattgtaatggatcatcttctgctcccgtcaactatggagca
ctctatttatctgttcaattgctttcatcctgtagagaagtggcttataaagattgttct
tcggttaaattagcaaaggaatcctggtggcttatcttagagaaaaagctggagcagttg
atccatctacttcgatccttttttactgtaacttctcggtctatgcagccactgtttaga
caagaatatgtctcttgtgctgtgaagggcttgctaacactagcaacattcccagaacag
tgctcgcctctgccagcaaatgcttatgaggatattctgcttatgtttacgtcaatagtt
ataaacaagtttgaaaatgtagatctgtggagattgtcattgaaagcattgaccagcatt
ggttcatctattgccgagttccatgcttctgaaagggaagtggtttactacagaacggtt
gttgacaagattgttcctttggttgaatcttatgatacttcaatgcctctgagtctaaga
ctcgaagcaagttatgaagttggaactgctgggttgaactatatgttaagagttgcgaaa
tcacttgaagtcgctgttgtcacgaatatttctgaatctgaggctaatggaagaatggaa
tgtgctgaacatgtggcccgtttatttgagtgctactctagccaggtccttccttggtta
ttaacttctggtggtgtcaatgaacttgcattgagcttcgctctgcgtctattggatgag
actaaggatttgactgtgttagatagaatcagctcacagggtctccttgactcactaatg
actgggatgaagcttttagttggagtatgtacagaggagcaacaatcacttatcgttcag
aaagcatatagcataatatcttcaatgctctcactcccaatgaaattgatgacaggccgt
cttttggctgtagatgagttagttccttcacattctgttccggaaaccgctctcatcagc
atgttttcgtcgattatagtaggccttcggcctcaaacacctgtaccagatatgatggtg
atgattaacctctttactgtctttctactaaatgggaaaatcccagctgcttatgcatta
gcttctattttcaataaatatctacacagtccagagttttcacgcgagaatcagctggat
aaaatacttgatgatattcttgagaggtgtttctcaactgtattagccaacagctcctca
aagatatcccactcttctgctggcacttcagatgatgttgattcctcagatgtcttctct
ggaaacaagctttctaagattaatatcttgtctagtttggcttggattggcaaaggatta
cttatgagaggagatgagaaggtgaaggacatttcaatgtttcttcttaagattctatgc
tcagatgagattttggctagtattccattccatcaggaagaaccttatagcggcaattca
tcagatacttctcttgcaatatctgcagctagtgcattccatgtgatgatgagtgattca
gaaatgtgtctaaataaaaaatttcatgcaagaataaaaccattatacaagcagcgtttc
ttctcaatactgatgccgatcttcctctctaaaattaaagaaacaactgcagtcacgaca
aaattggcagtataccgagcttttgggcatatcatttccaatgctccagtaccagcagtt
ataacagaagcacaccagattttacttgtgatggttgatagcttagctaaattaagtttg
gacattgaggacaaggatctggtgtacagtttgttacttgtcttctctggaatgttgatg
gatgaaaagggcaaagaatgcattctggacaatatccaaatcacaatcagtgttcttacc
gaacttgtttcctaccctcacatgatggttgtgcgggagacagcattacaatgtttagtg
gccttttctacgttacctcactcaaaaatttatcctatgcggcgtaaggttgtacaagca
gcaatcaaggctctcgatgataagaaaagagctgttcgtcaagcggctgttagatgtcgg
caaacatggcaatcctttgcttaa

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