Sorghum bicolor (sorghum): 8060849
Help
Entry
8060849 CDS
T01086
Name
(RefSeq) heat stress transcription factor A-1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8060849
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
8060849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
APG6_N
TMF_TATA_bd
CENP-F_leu_zip
BRE1
Tropomyosin
XhlA
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
8060849
NCBI-ProteinID:
XP_002466076
UniProt:
C5WRZ8
A0A921RUU9
LinkDB
All DBs
Position
1:complement(718251..722282)
Genome browser
AA seq
527 aa
AA seq
DB search
MQGGVVAHAAAAAAAASTVTTAVAPPVPAHAAVVGNGGGPAAAAPPPPFLMKTYEMVDDP
ATDDVVSWGPGNNSFIVWNTPEFARDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRWEFA
NEGFLRGQKHLLKTINRRKPSLQGNSQPQQPQLQNAPVPSCVEVGKFGLEEEIERLKRDK
NVLMQELVRLRQQQQTTDHQLQTLGKRLQGMESRQQQMMSFLAKAMQSPGFLAQFVQQNE
NSRRRIVAANKKRRLPKQDGGLDSESAAASLDGQIIKYQPLINEAAKAMLRKILKLDSSH
RFESMGNSDNNNFLLENYMPAAQAFESSSSTRNSGVTLAEVPANSGLPYVSASSGLSAIC
SPSVAPEIQCPVVLDNKLSNQVPNMSAVPPVSNPITAGSSDISIPEFSDLADLVNEDSVN
IPGGAFEMPGPEFPLPEGDDSVPIETDETMYNNDETQSLPGIIDSFWEQFLVGSPLSADN
DEVDSGGLDARGSPQENGWSKVGNISNLTEQMGLLSSTNHRDSGNGL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcggtgtcgtggcccacgccgccgccgccgcggcggccgcgtcgacggtgacc
actgcggtggcgcctccggtgccggcgcacgcggcggtggtgggaaacggcggcgggccg
gcggccgccgcgccgccgccaccgttccttatgaagacgtacgagatggtggacgacccg
gccaccgacgacgtcgtgtcctggggccccgggaacaacagcttcatcgtctggaacacg
cccgagttcgccagggacctcctgcccaagtacttcaagcacagcaacttctcatcattc
gtcaggcagctcaacacctacgggtttagaaaggttgatccagacagatgggaatttgca
aatgagggttttcttagaggacaaaaacatctgctgaagactatcaacagaaggaaacca
tccttgcaggggaacagccaaccacagcaacctcagttgcagaatgctcctgtgccttcc
tgtgtagaggtgggcaagtttgggttggaggaagagatagaacggctgaaaagggataag
aatgttcttatgcaagagcttgtcaggctgagacagcaacagcaaacaactgaccatcag
cttcagactttgggcaagcgtcttcaagggatggagtcacggcagcaacagatgatgtct
ttcctggctaaggcaatgcaaagtcctggtttcctagcacagtttgtacagcaaaacgag
aatagtagaagaagaatagtagctgcgaacaagaaaaggcggctacccaagcaagatggt
ggcctagactctgaaagtgctgctgcttcgttagacggtcaaattatcaagtatcaacct
ttgatcaacgaagcagccaaagcaatgctaaggaagatcctaaagctagattcttcgcat
aggtttgaatctatgggcaattcagataataataattttctgctggagaattatatgcca
gctgctcaagcttttgagagctcttcgtcaacaagaaattctggggtcacccttgcagag
gttccagctaactcgggcttgccctatgtcagcgcaagctctggactgtcagctatctgt
tctccttcagtggctcctgaaatccagtgcccagttgtgctggacaacaagttgtctaac
caagtgcccaacatgagtgctgtgcctcctgtttcaaaccctataacagcaggctcaagt
gacatcagcattccggaattctcagatctggcggacttggtaaacgaagactctgtcaat
attcctggaggggcctttgagatgcctggtcctgagtttcccctgccagaaggtgatgac
agtgtccccatcgagactgatgagaccatgtacaacaatgacgagactcagagccttcca
ggcatcatcgactccttctgggagcagttcctggtaggcagccctctatccgccgataat
gatgaagttgattcaggcggactagatgcaaggggttcaccacaggagaatgggtggagc
aaagtggggaacatctccaatcttacagaacagatgggccttctatcatcaacaaatcac
cgggactcagggaatgggctgtaa
DBGET
integrated database retrieval system
