Sorghum bicolor (sorghum): 8061050
Help
Entry
8061050 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase ATL31
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8061050
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8061050
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
8061050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-RING_16
zf-RING-like
Prok-RING_1
zf-C3HC4_3
Tmpp129
FANCL_C
RINGv
zf-Nse
Motif
Other DBs
NCBI-GeneID:
8061050
NCBI-ProteinID:
XP_002440130
UniProt:
C5YUG4
LinkDB
All DBs
Position
9:55627003..55629798
Genome browser
AA seq
393 aa
AA seq
DB search
MGPINGRRLKLLAAVALAGAAVDSVTAQQGKGPDYFNPKNFNPSMAIVMVVLVTAFFLLG
FFSIYLRRCAGPPLGGPDDDDEYPVGLGRRPGVGFTYASASRSRRMRGLDRAVLDSFPTM
AYADVRAHKAGKGALECAVCLCEFDDDDTLRLLPRCAHAFHTDCIDAWLASHVTCPVCRA
VLAAPDAADAPAAPATERDQVVPPVPAAPPDQAVVDADAAAGETEDQRVRREEAAELMRI
GSVKRALALRGKSGRRPAQFPRSHTTGHSLAVAAPSHSPSSTLDSERYTLRLPDHVLREA
IAAGNLRRSASVQTGGDGTTTRRGYGRSVRLGNSGRWSNMSLLARTFSARLPVWGSVRRG
EADAPAKGAKFAGDDGKAVEQCDGGACSLGAHV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgatcaatggccgccgtctcaagcttctcgccgcggtggctctcgccggcgcc
gccgtggactccgtgacggcgcagcagggcaaagggccagactacttcaaccccaagaac
ttcaacccgtccatggccattgtcatggtcgtgctcgtcacggccttcttcctgctcggc
ttcttctccatctacctccggcgatgcgcggggcccccgcttggcgggcccgacgacgac
gacgagtaccctgtggggctggggcgccgcccgggggttgggttcacctacgcgtcggcg
tcgcggtccaggaggatgcgcggcctcgaccgggccgtgctggactccttcccgaccatg
gcctacgccgacgtcagggcgcacaaggcaggcaagggcgcgctcgagtgcgccgtctgc
ctctgcgagttcgacgacgacgacacgctccggctcctgcccaggtgcgcccacgcgttc
cacaccgactgcatcgacgcctggctcgcgtcgcacgtcacctgccccgtctgccgcgcc
gtcctcgccgcccccgacgccgccgacgcccccgcggctccggccacggagcgtgaccaa
gtcgtcccgcctgtccccgcagcgccgccggaccaggcggtggtcgacgccgacgccgct
gccggggagacagaggaccagagggtcaggagggaggaggccgccgagctgatgcggatt
ggcagcgtgaagcgcgccctggcgctgcgaggcaagtcgggccggcgccccgcgcagttc
ccgcgctcgcacaccacgggccactcgctcgccgtcgccgcgccgtcgcactcgccttct
tccaccttggactcggagcgctacacgctgaggctgcccgaccacgttctccgggaagcc
atcgctgcgggcaaccttcggcggtctgcgagcgtccagacaggtggtgacgggacgacg
acgcgccgcggctatggaaggagcgtccggctcggcaactccggccggtggtccaatatg
tccctcctggcgcgcaccttctccgcgaggctgccagtgtggggctccgtgcggcgcggt
gaggccgacgctccagccaagggtgccaagttcgccggcgacgacggcaaggccgtggag
cagtgcgacggcggagcttgctcgcttggcgcccatgtttga
DBGET
integrated database retrieval system
