Sorghum bicolor (sorghum): 8061092
Help
Entry
8061092 CDS
T01086
Name
(RefSeq) farnesyl pyrophosphate synthase
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00900
Terpenoid backbone biosynthesis
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
8061092
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sbi01006
]
8061092
Enzymes [BR:
sbi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
8061092
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
8061092
Prenyltransferases [BR:
sbi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
8061092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
8061092
NCBI-ProteinID:
XP_002441458
UniProt:
A0A921QE31
C5YUX0
LinkDB
All DBs
Position
9:complement(56105052..56108807)
Genome browser
AA seq
353 aa
AA seq
DB search
MAADGNGAAAAGGDTRAVFAQIYKTLKEELLTDPAFEFTEESHQWIDRMVDYTVLGGKCN
RGLSVVDSYKLLKGADTLSEEEMFLACTLGWCIEWLQAFFLVLDDIMDESHTRRGQPCWF
RVPQVGFIAVNDGIILRNHISRILRRHFKGKPYYADLLDLFNEVEFKTASGQLLDLITTH
EGEKDLTKYNITVHGRIVQYKTAYYSFYLPVACALLLSGENLDKYGDVENILVEMGTYFQ
VQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKRILFENYGKKDPACVAK
VKNLYKELNLEAVFQEYESESYKKLIADIEAQPSIAVQNVLKSFLHKIYKRQK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacgggaacggcgcggccgctgccggcggggacaccagggcggtcttcgcg
cagatctacaagacgctcaaggaggagctgctcaccgaccccgccttcgagttcactgag
gagtcgcaccagtggatcgaccgcatggttgactacactgtactcggaggcaagtgtaac
cgtgggctctctgtggttgatagctacaagctgctgaagggtgctgatactctgagcgag
gaggaaatgttccttgcttgcacccttggctggtgcattgaatggcttcaagctttcttt
cttgtgcttgatgatatcatggatgagtcccacactcgtcgtggccagccttgctggttc
agggtgcctcaggttggcttcattgctgtgaatgacgggattatccttcgcaaccatatc
tcacggatccttaggcgccactttaagggcaagccttactatgctgatctccttgacttg
ttcaatgaggttgagttcaagacagcttcaggtcagctgctggaccttatcacaacccat
gagggagaaaaagatctgacaaagtacaacataacagttcacggtcgtattgttcaatac
aagacagcctactattcattttatctgccggttgcatgtgccctgctgctctctggcgag
aatttggacaagtatggtgatgtagagaacatccttgttgaaatgggaacatactttcaa
gtccaggatgactatctggattgttatggtgatcctgaatttattggcaagattggaact
gacattgaagattacaagtgctcatggctagttgtgcaagcccttgagcgtgctgatgag
agccaaaagcgcattctatttgaaaattatggcaagaaagatccagcttgtgtggcaaaa
gtgaagaacctctacaaagaacttaacctagaggcggtatttcaggagtacgagagtgag
agctacaagaagctgattgcagacattgaagcccagccaagcatcgcggttcagaacgtg
ctgaagtccttcttgcacaagatctacaagaggcagaagtag
DBGET
integrated database retrieval system