Sorghum bicolor (sorghum): 8061097
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Entry
8061097 CDS
T01086
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
8061097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8061097
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
8061097
Prokaryotic type
Archaeal type
TFB
8061097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
HTH_36
CHASE3
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID:
8061097
NCBI-ProteinID:
XP_002441464
UniProt:
C5YUY1
LinkDB
All DBs
Position
9:complement(56215842..56217145)
Genome browser
AA seq
362 aa
AA seq
DB search
MRRRRHNTQRHDQRAPTAHTKATKHETQPARLPPIETASLGSKRRRRVTSAPFTNACSAP
IDTHNAAAEEAALPRRMPSAPEAPSSSGLGLQRMRGYVTLSLRTPGQEEEPPTVSLSLSL
NTTPPPPGHHPVEEEDPATAAAAAVQQPRGGDKAMSEAYGAIANMAARLGIAAGARDRAV
EVFLRMEERKGKAHHYYTKGAGRSGDALYAACLYVACRRAGAPRTFKELAAATRDGPAAR
KDIGKLIALIRKRLGDEAGGGEAMMDIGVVRAADYVARFGSQLGMEAGEVRAVQEAARRM
QDQLDVRRNPDSTAAAIIYMAMERRAGAGRSIRDVSAATGVAENTIKQAYRELYPHADML
FG
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgtcgccgccacaacacacaaagacacgaccagcgagcgcccactgcccacaca
aaggccacgaaacacgagacccagccagccagactgccaccgatcgaaacggcatctctt
ggttcgaaacgccgccgccgagtgacgtcagcgcccttcacgaacgcgtgctcggcgccg
atcgacacgcacaacgccgcggccgaggaagccgccctgccgaggaggatgccttcggcc
ccggaggcaccatcctcgtccggcctcggcctgcagaggatgcgcggctacgtgaccctg
tcgctcaggacgcccggtcaggaggaggagcccccgaccgtgtctctctcgctctcgctc
aacaccacgcctccgccgccgggtcatcatccggttgaggaggaggaccccgcgacggcg
gcggcggcggccgtgcagcagccccgcggcggcgacaaggccatgtccgaggcgtacggc
gccatcgccaacatggcggcgcggctcgggatcgcggcgggcgcgcgtgaccgcgcggtg
gaggtgttcctgaggatggaggagcgcaagggcaaggcgcaccactactacaccaagggc
gccgggcggagcggcgacgcgctgtacgcggcgtgcctctacgtggcttgccgccgcgcg
ggggcgccgcggacgttcaaggagctggcggcggcgacgcgcgacgggcccgcggcgagg
aaagacatcggcaagctcatcgcgctcatccggaagcgcctcggggacgaggccggcggc
ggggaggccatgatggacatcggcgtcgtgcgcgcggcggactacgtggcgcgcttcggc
tcgcagctggggatggaggcaggcgaagtgcgcgccgtgcaggaggccgcgcggaggatg
caggaccagctcgacgtgcgccgcaacccggactccaccgccgccgccatcatctacatg
gccatggaacgccgggctggcgccgggaggtccatccgggacgtgtccgcggccaccggc
gtcgccgagaacaccatcaagcaggcgtacagggaactctacccgcacgccgacatgctc
ttcggctga
DBGET
integrated database retrieval system
