Sorghum bicolor (sorghum): 8061256
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Entry
8061256 CDS
T01086
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8061256
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
8061256
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
MMR_HSR1
AAA_15
RsgA_GTPase
AAA_28
AAA_27
AAA_22
AAA_24
Motif
Other DBs
NCBI-GeneID:
8061256
NCBI-ProteinID:
XP_002442114
UniProt:
A0A921QFA9
C5YNK1
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All DBs
Position
8:42258555..42262336
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AA seq
595 aa
AA seq
DB search
MVSEASKKKAAQKKAAAAAKRGGKAAVASSSSSSAAAAADKAANGVAALKLSDRTCTGVL
ASHPLSRDIHIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELP
IPEHMDIYHLSHEIEASDMSALQAVVTCDEERVKLEKEAEILAAQDDGGGEALDRVYERL
DAMDAGTAEKRAAEILFGLGFNKEMQAKKTKDFSGGWRMRIALARALFMNPTILLLDEPT
NHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQSKKLKLYTGNYDQYVQT
RSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVV
RDRVLVFRFTDVGKLPPPVLQFVEVKFGYTPDNLIYKSLDFGVDLDSRIALVGPNGAGKS
TLLKLMTGDLVPLDGMVRRHNHLRIAQYHQHLAEKLDLDMPALAYMMKEYPGTEEEKMRA
AVGRFGLSGKAQVMPMKNLSDGQRSRVIFAWLAYRQPQLLLLDEPTNHLDIETIDSLAEA
LNEWDGGLVLVSHDFRLINQVAQEIWVCENQAVTRWEGDIMDFKAHLKSKAGLSD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggaggccagcaagaagaaggccgctcagaagaaggccgccgcggccgcgaag
aggggaggcaaggccgcggtggcgtcctcatcgtcttcatctgcggccgcggccgccgat
aaggcggcgaacggcgtcgcggcgctcaaactatcagaccgcacctgcaccggggtcctc
gcgtctcacccgctctcccgcgatatccacatagagtctctttctttaacattccatggg
catgaccttattgtggattctgagttggagctgaactatggaaggcgatacggtttgctt
gggttgaatggctgtgggaaatctactcttctcacagcaataggctgcagagaacttcct
atccctgaacacatggacatataccatctaagccatgagattgaagcttctgacatgtct
gcactgcaagccgttgttacttgtgacgaagaaagagtaaagttggaaaaggaagctgaa
attttggctgcacaggatgatggtggtggcgaagcactggatcgtgtttatgagcgtcta
gatgcaatggatgctggaactgcagaaaagcgagctgctgaaatattattcggtctgggt
tttaacaaagaaatgcaggcaaagaaaactaaagatttctctggaggttggcgtatgagg
attgctttggcgagagcactgtttatgaatccaacaatccttttgcttgatgagccaaca
aaccatctagatcttgaagcttgtgtctggttggaagagacactaaagaaatttgaccgc
atacttgttgtcatatcacactctcaagattttctaaacggagtgtgcactaacattatc
catatgcaaagcaagaagctcaagttatacaccggtaactacgatcagtatgttcaaact
cgctccgagcttgaagagaatcaaatgaagcagtacaaatgggagcaggaacagattgca
tcaatgaaggagtacattgctcgtttcggtcatggttctgcaaagcttgctcgccaggct
cagagcaaagagaaaactcttgcaaagatggagcgaggtggtctcactgagaaggttgtt
agggacagagttctagtgttccggtttacagatgttggcaagcttcctccgcccgtgctg
cagtttgttgaagtcaagtttgggtatacaccagataatctcatatacaagagtctggac
tttggtgttgatcttgactctagaatcgcattggttggtcccaatggggcagggaagagc
actcttctgaagcttatgactggtgatcttgttccattagatggcatggttcggcgccat
aatcacctgcgcattgcacagtaccatcagcatctggcggagaagctggatctggacatg
ccagccctggcttacatgatgaaggaataccctgggactgaagaagagaagatgcgagct
gctgttggcaggtttggcctgtcaggaaaggcgcaggtgatgccgatgaagaatctttct
gatgggcaaaggagccgtgtcatctttgcatggctggcatataggcagccgcaactgcta
ctgctcgatgagccgacaaaccatctggatattgagaccattgactccctggccgaggca
ctgaatgagtgggatggtggtttggttctagtgagccatgatttcaggctgatcaaccag
gttgctcaagagatctgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatc
atggatttcaaggcacacttgaagagcaaggctggtttatctgattag
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