Sorghum bicolor (sorghum): 8061304
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Entry
8061304 CDS
T01086
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8061304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8061304
03110 Chaperones and folding catalysts [BR:
sbi03110
]
8061304
03029 Mitochondrial biogenesis [BR:
sbi03029
]
8061304
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8061304
Enzymes [BR:
sbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
8061304
Messenger RNA biogenesis [BR:
sbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
8061304
Chaperones and folding catalysts [BR:
sbi03110
]
Heat shock proteins
HSP60 / Chaperonin
8061304
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
8061304
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
8061304
Exosomal proteins of other body fluids (saliva and urine)
8061304
Exosomal proteins of breast cancer cells
8061304
Exosomal proteins of colorectal cancer cells
8061304
Exosomal proteins of bladder cancer cells
8061304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MatP_C
Motif
Other DBs
NCBI-GeneID:
8061304
NCBI-ProteinID:
XP_002440887
UniProt:
A0A921U4B3
C5YW53
LinkDB
All DBs
Position
9:complement(36078659..36083477)
Genome browser
AA seq
577 aa
AA seq
DB search
MASANAISTASLISPLSQGRARRARNGRSQRFVVRAEAKDIAFDQKSRAALQAGVEKLAN
AVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELYDPMENAGAALIREVASKTNDSAG
DGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVQGLIQELENKARPVKGGGDIKA
VASISAGNDEFIGSMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVT
NLEKSIVEFENAKVLITDQKISSIKEILPILEKTTQLRAPLFIIAEDITGEALATLVVNK
LRGILNVAAIKAPSFGERRKAVLQDIAIVTGAEFLAKDLGLLVENATEAQLGTARKVTIH
QTTTTLIADAASKDEIQARVAQLKKELAETDSVYDTEKLAERIAKLAGGVAVIKVGAATE
TELEDRQLRIEDAKNATFAAIEEGIVPGGGTAYVHLSTVVPSIKEKIEDPDERLGADIIQ
KALVAPASLIAHNAGVEGEVVVEKIKDSVWEVGYNAMTDTYENLIEAGVIDPAKVTRCAL
QNAASVAGMVLTTQAIVVEKPKPKPQVAEPSEGSLAV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgcgaatgccatctccaccgcctccctcatctcgcccctctcgcagggcagg
gcgaggagggccaggaatggccggtcacagcgcttcgtagtgcgtgcggaggccaaagac
atcgcctttgaccagaaatccagggcagccctgcaggccggcgtcgagaagctcgcaaac
gccgtcggtgtcaccctggggccacgagggaggaatgtggtgctcgatgagtatggcagc
cccaaagttgtgaatgatggagtcactattgcccgggctattgagctgtatgatccaatg
gaaaatgctggtgcagcattgattcgtgaggttgctagcaagaccaatgattctgctggt
gatggcactacaactgcttccgtccttgctcgtgaaatcatcaagctaggccttctgagt
gtaacgtctggtgcaaatcctgtgtcacttaagaagggaatcgacaaaactgtgcagggt
ctaattcaggagcttgagaataaggctagaccagtcaagggtggtggtgatatcaaagct
gttgcatctatctctgctggcaatgatgaatttatcggatccatgattgctgaagcaatt
gacaaagtggggcctgatggtgttctttcaattgaatcctcctcatcttttgagactact
gttgaagttgaagaaggaatggagattgaccgtggttatatttctccacaatttgtgaca
aaccttgagaaatctattgtggagtttgagaatgctaaggttcttattactgatcagaag
atctcaagcataaaggaaattcttccaattctggagaagaccacacagctgagagcccct
ttgttcattattgctgaggacattactggtgaagctttggcaactcttgttgttaacaag
cttcgaggaattctaaatgttgcagcaattaaggctccaagctttggtgagcggcggaag
gctgtacttcaggacattgccattgtcacaggtgctgagttcctagcaaaagatcttggt
ttgttggttgaaaatgctacagaggcacaacttggtacagcaaggaaagtcacaatacat
cagactacaacaaccctcatagcagatgcagccagtaaagatgaaatccaagcgagggtt
gcacagctaaagaaggagcttgctgagactgattcagtttatgatactgagaaattggct
gagagaattgctaagcttgctggtggtgttgctgttatcaaggttggagccgcaactgag
actgagcttgaggaccgccagctaagaattgaggatgcaaaaaatgccacttttgcagct
atagaggagggcattgttcctggaggtggtacggcatacgtgcacctatctaccgttgtc
ccttcgatcaaagaaaaaattgaggaccctgatgagcgccttggtgctgatattattcaa
aaggcattggtagcacctgcttcattgattgcacacaatgctggagtagagggtgaagtg
gttgttgagaagatcaaggacagtgtgtgggaggtgggctacaatgcaatgacggataca
tacgagaacctgattgaggctggtgtgatcgaccctgctaaggtgactaggtgtgcgctc
caaaatgcggcctcagtagctggaatggtcctaaccacacaggcaatagttgttgaaaag
ccaaagccgaagcctcaagtggcagagccatcagagggaagccttgccgtgtaa
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