Sorghum bicolor (sorghum): 8061421
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Entry
8061421 CDS
T01086
Name
(RefSeq) protein GLE1
KO
K18723
nucleoporin GLE1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8061421
03015 mRNA surveillance pathway
8061421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8061421
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8061421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
BCDHK_Adom3
Motif
Other DBs
NCBI-GeneID:
8061421
NCBI-ProteinID:
XP_002463669
UniProt:
C5WW15
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All DBs
Position
1:3227604..3236666
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AA seq
604 aa
AA seq
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MGFERVELRCPRELDPRPSWTLGDVLGELDALDATHRAAPPTPLKQPPDWANGGGAREKA
FVMRVEDDDEDDTEDEDDGTSHGKSWALVAKGARFSCNDLESSDSEDELDGQVAPYRLME
KRDLAKSILLELEREHHLKVQEEVRNKLASLEVCHQNEIQRTISAFARLQKYAESRKEID
RRLDVHFQRRIAEVLDKHLSMVQRDHEQKSQIVERRIRDDAALEEAKRKEQAVKEEKLRQ
ERARQEAEARQKEAAKLAAEARKTAFEAAKKEAAEKEAAEKEAAKLRDAAASQSSPNSQN
NIAGIKVYADKYALEAESRRRALVQNQVPENIHLSKEFSKYDRQIAKSISKLMPTTDSVR
ARASELIKALDGQDCPRPISCYLFANKIISIVKSRNTKDKTFGNLAFACGYVMLLVTNQV
PDAMDYLLAEFNRVCIYTVPKHLHALNAQARTRDYYKLIGYEEENEQLESTESYLTYVVA
YVKLYAAMIQTEIKGVRHPHGLAEGWKWLAMFLNSLPATTATACALHAFLKMAGFALHKK
YGSQFMKILDVISRCFLPALKEQGNKMQAEAVNNLQNYLNDKIYLEEPEGQYLVQQLLSK
ELFM
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagcgtgtggagctgcggtgtcccagggaactggacccgcgcccgagctgg
acgctcggcgatgtgcttggcgagcttgacgcgctggacgccacccaccgcgctgcgccg
cccacgcccctgaagcagccgccggattgggctaacggcggcggtgcgagggagaaggcc
tttgtgatgcgggttgaagatgatgatgaagacgacacagaagatgaagacgatggtacc
agtcatgggaagtcctgggctcttgtggccaaaggagccaggttctcgtgtaatgatctc
gaatcaagtgattcagaggatgaattagatggccaggttgccccataccgcttaatggag
aaaagggacctagcgaagagcattcttcttgagctggagcgcgagcatcatctaaaagtt
caagaagaagttagaaataagttagcttcattggaggtatgccaccaaaatgaaattcag
agaacaatttctgcattcgcacgacttcagaaatatgcagaatcaagaaaagagatagac
agaagactcgatgtacacttccagagaagaattgcagaagtgctcgataaacacttatct
atggtccaaagggatcatgaacaaaaatcccagattgttgaacgtcgaatcagagatgat
gcagctcttgaagaagctaaaagaaaagagcaagctgtcaaggaagaaaagttaaggcag
gaaagagctcggcaagaagcagaggctaggcagaaggaagctgcaaaattagcagctgaa
gcacggaaaacagcatttgaggctgctaaaaaggaagcagcagaaaaggaagcagcggaa
aaggaggctgctaaattgagagatgcagcagcttcccaatctagtccaaattcccagaat
aatattgcaggtatcaaagtttatgctgataaatatgcattagaagcagagtcacggagg
cgtgcattagtacagaatcaagtgccggaaaacattcatctcagcaaggaattcagcaaa
tatgaccgacaaattgccaaatccataagtaaacttatgccaactactgatagtgtcaga
gcaagggccagtgagcttattaaagctttagatggacaggattgtccccgtccaatctct
tgttatctatttgcaaacaagattatttcaattgtcaagagtagaaatacaaaggacaaa
acttttgggaatttggcctttgcatgtggatatgtcatgctcttagtcacaaaccaggtg
ccagacgcaatggattatcttttagctgaattcaacagagtttgcatatacacagttcca
aagcatctgcatgctttaaatgcacaagcacgaactagagattattacaaactgataggt
tacgaggaagaaaatgaacaactcgagagcactgaaagttatctaacatacgtcgttgca
tacgtcaaactgtatgcggcaatgattcagacggaaatcaaaggtgtacgtcatcctcat
ggcttagctgagggatggaaatggctcgccatgttcctcaattctctcccagctactaca
gccactgcctgtgcccttcacgctttcctaaagatggctggttttgcacttcacaagaaa
tatggatcacagttcatgaagatcctggatgtaatatcacggtgctttttaccagctttg
aaagaacaaggcaacaagatgcaggctgaggctgtcaacaatctacagaattatctgaac
gacaagatctacctggaggaaccagaagggcagtacctcgtccagcaactactatccaag
gagttgttcatgtaa
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