Sorghum bicolor (sorghum): 8061422
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Entry
8061422 CDS
T01086
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
sbi03015
mRNA surveillance pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8061422
09122 Translation
03013 Nucleocytoplasmic transport
8061422
03015 mRNA surveillance pathway
8061422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8061422
03041 Spliceosome [BR:
sbi03041
]
8061422
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
8061422
Spliceosome [BR:
sbi03041
]
Complex C
Other components
EJC/TREX
8061422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
8061422
NCBI-ProteinID:
XP_002466233
UniProt:
A0A1Z5S4A2
A0A921RVS7
LinkDB
All DBs
Position
1:complement(3259820..3264555)
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AA seq
197 aa
AA seq
DB search
MVAAMGRAAAEEGDVEFVDYDQDDEDAMEEDGRAARALPVPRIVSPAVVRTRGRFAGRSP
SVLTSSHYRFDSITNDGDHGPGPQRSIEGWTILVSGIKEDAEEDDFYNAFSEFGHVKDLH
LNLERRTGYAKGYALIEYESFEEAQAAIRAMNGSQLLTKTIYVDWAFSRGPIQNFKSTRP
SRPRSRTPPRRLAALRP
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggcgatggggcgagcggcggcggaggagggtgacgtggagttcgtcgactac
gaccaggacgacgaggacgccatggaggaggacggccgcgccgcgcgcgcgctccccgtg
ccccgcatcgtctcccccgccgtggtgcgcacccgcgggcgcttcgcgggtcgcagcccc
tccgttctcacttccagccactaccgcttcgactccatcaccaatgacggagaccatggt
cccggcccgcagcgctctatcgaaggctggacaattcttgtttctggaattaaagaggac
gctgaagaagatgatttttacaatgctttcagtgaatttggtcatgtcaaggacttgcat
ctcaatctagaacgccgcactggatatgccaagggatatgcgctgattgaatatgaaagc
tttgaggaagcacaagctgcgatcagagcaatgaacgggagtcagctgctcacaaaaact
atctatgttgactgggctttcagcagaggtccaatacagaatttcaagagtacaaggcca
tcacgcccaagatctaggactcctccgcgtaggctagctgccttgaggccatag
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