Sorghum bicolor (sorghum): 8061431
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Entry
8061431 CDS
T01086
Name
(RefSeq) ubiquitin domain-containing protein DSK2a
KO
K04523
ubiquilin
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8061431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8061431
03051 Proteasome [BR:
sbi03051
]
8061431
Membrane trafficking [BR:
sbi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
8061431
Proteasome [BR:
sbi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
8061431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Dsc3_N
Rad60-SLD_2
Ubiquitin_2
HEAT_HEATR1
GerD
Motif
Other DBs
NCBI-GeneID:
8061431
NCBI-ProteinID:
XP_002465921
UniProt:
A0A921S6T8
C5WZW0
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All DBs
Position
1:78373185..78377812
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AA seq
538 aa
AA seq
DB search
MGGGDGDADAGGEPAAAQATLHIRCTNGSKFAVRADLGTTVGAFKAIVAESCDVPAPQQR
LIYKGRILKDDQTLASYGVETDHTIHMVRGAAPPPASTAPAANQEPTTAAPASSPAAGLG
GLLQSLGATGAAANSGGSGLFGSGLPELDQMQQQLAENPNLMREIMNMPLMQNLMNSPEL
IRSIIMNNPQMRELIDRNPDLAHVLNDPSIMRQTFEAVRNPELMREMMRNTDRAMSNIES
SPEGFNMLRRMYETVQEPFLNATTMGSEGDRNSNPFAALLGNQGSNQARDSAANGTTTAS
DPTSGSPAPNTNPLPNPWGPNAGSTQGAARSPPASNTRSTTASGLGGLGSADLGSMLGAS
GGGSDATFLTQVLQNPTMMQMMQNIMSNPQSMNQLLNMNPNVRNMMESNTQMREMIQNPE
FLRQLTSPETLQQLISFQQSLMSQLGQQQAGQERTQSGSGAGNVNLNTLMNMFSGLGAGG
GLGVPNAPNVPPEELYATQLAQLQEMGFFDTQENIRALAATAGNVHAAVERLLGNMGQ
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgggcggaggggacggggacgccgacgccggcggcgagcccgcggccgcgcaggccacg
ctgcacatccggtgcaccaacggctccaagttcgccgtgcgggccgacctgggcaccacc
gtcggggcgttcaaggcgatcgtcgccgagagctgcgacgtgccggcgccgcagcagcgg
ctgatctacaagggtcggatcttgaaggacgaccaaaccctagccagctacggtgtggag
acagaccatacaatccacatggtacgtggtgctgcgccaccaccagcatctactgcacct
gcagccaaccaagaacctaccactgctgctcctgccagttccccggcagcaggattgggt
ggcttgttacaaagtctgggtgctacaggggctgctgctaacagtggggggtcaggtttg
tttggatctggcctccctgagttagaccagatgcaacaacagctagcggaaaatccgaac
ttgatgagggaaataatgaatatgccacttatgcagaatttgatgaacagtcctgaactc
atacgcagtataataatgaacaatcctcaaatgcgtgagcttattgatcgcaatccagat
cttgctcatgtcctcaatgatccaagcatcatgcgccagacttttgaagcagttcggaat
cctgaactcatgagggagatgatgcggaacacagacagagccatgagcaacattgaatct
tctccagaaggattcaacatgctccgtcgcatgtatgaaactgtccaagagccttttctg
aatgcaacaacaatgggtagcgagggtgatcgaaactcgaatccatttgctgctcttcta
ggaaaccaggggtctaaccaagcaagagactcagctgcaaatggaacaactacagcttca
gaccccacttcaggctctccagctccaaatactaatccacttccaaatccttggggccca
aatgctggctctacccaaggagcagcaaggtcccctcctgctagcaacactaggagtacc
acagcaagtggcctaggagggttgggttcagcagatttgggaagtatgcttggtgccagt
ggtggtggctctgatgctaccttcttgactcaagttttgcaaaacccaactatgatgcag
atgatgcaaaacattatgtctaatcctcagtccatgaatcagctgcttaatatgaatcca
aatgtacgtaacatgatggaatccaatactcaaatgagagaaatgattcagaatccagaa
tttcttcgccagttgacgtctcctgaaacattgcagcaattaatttcattccagcagtct
ttgatgtcacaacttggccaacaacaagctggacaggagcggacacaatcaggctctggt
gcaggcaatgtcaacctcaacaccttgatgaacatgttcagcgggcttggtgctggtggt
ggcctaggtgttccaaatgctcctaatgtgccgccagaagaactgtatgcaacacaatta
gctcagctccaagaaatgggtttctttgacacacaggagaacatccgagccttggccgct
accgctggaaatgttcatgctgcagtggagcgacttcttggaaatatgggccaatag
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