Sorghum bicolor (sorghum): 8061443
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Entry
8061443 CDS
T01086
Name
(RefSeq) DNA polymerase delta small subunit isoform X1
KO
K02328
DNA polymerase delta subunit 2
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03030
DNA replication
sbi03410
Base excision repair
sbi03420
Nucleotide excision repair
sbi03430
Mismatch repair
sbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
8061443
03410 Base excision repair
8061443
03420 Nucleotide excision repair
8061443
03430 Mismatch repair
8061443
03440 Homologous recombination
8061443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbi03032
]
8061443
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8061443
DNA replication proteins [BR:
sbi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
8061443
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
8061443
MMR (mismatch excision repair)
DNA polymerase delta complex
8061443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
8061443
NCBI-ProteinID:
XP_002465940
UniProt:
C5WZZ1
A0A921V353
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All DBs
Position
1:78637867..78641881
Genome browser
AA seq
435 aa
AA seq
DB search
MPVPKPMERKQAAYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPQLP
VTTVLGLEEGKDCIIVGTLYKHMKLKPSILDEYAKERSAIPLVKPHNFMHPDDHLILEDE
SGRVTLAGAIPPAAFVTGVVVALHGKETSAGNFLVEDVLEAGLPPQTALSSAAEDKYVVF
VSGLSVGSDTFNPLQFQLLIDHVTGHLGDENEQSIASNIVRVVVAGNSVHISPRFVNGQT
VASKDQSRIAEPIKELDIMLTQLVASLPVDMMPGCHDPANFSLPQQPLHRCLFSGASTYN
TFSSCSNPHQFELDSVQFLGTSGQNIDDLYKYSDAKDKLEFMERTLRWRHLAPTAPNSLG
CYPYTDKDPFLVESCPHVYFVGNQDKYETRLLEGPEKQKVRLISIPRFSESGVAVMLNLR
NLECSTLSFSTSFDA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgccgaagccgatggagaggaagcaagccgcctacagcaacctcgatgagagg
tacgcgatccagggggagaagtaccaggggcagcagtacagccacatctacttcacgcgc
cttcaccacatgcggaatctgctccacgccctcgtcccctcctggaagccgcaactccct
gtcactacagtgttaggactcgaagaaggaaaggattgcataattgttggaactttatat
aagcacatgaagttgaagccttccattcttgatgaatatgccaaagagaggtctgcaatt
cctcttgtcaaaccgcataatttcatgcatcctgatgatcatctcattctcgaagatgaa
agtggaagggttacacttgcaggagccattcctccagcagcatttgtgactggggttgta
gtggctctccatgggaaggaaacaagtgctggcaactttcttgttgaagatgttcttgag
gctggtcttcctccccaaactgcattgtctagcgcagcagaagacaagtatgtggtattc
gtatctgggctaagtgtaggaagtgacacattcaatcctctacaattccaactccttatt
gaccatgtcacagggcatctgggtgatgagaatgagcaatccatagcatcaaatatagta
cgtgttgtggttgctgggaattcagtgcatatttcaccaaggtttgtcaacggtcagacg
gtagcatcaaaagatcaatccaggatagcagagcctatcaaggaattggatataatgctt
acccagctcgtggcatcgttgcctgtagatatgatgccggggtgtcatgatccggcaaat
ttttctttgcctcagcagcctctgcacagatgccttttctctggggcatccacgtacaac
actttctcgtcatgttcaaatccccatcaatttgagcttgacagtgtccagtttcttgga
acatctggccagaacatagatgacctgtacaagtactctgatgctaaagacaagctggaa
ttcatggaaagaacactgagatggcgccatcttgctcctactgctccaaatagtctaggc
tgttatccatacacagacaaggatcctttccttgttgaaagttgcccgcacgtctacttt
gttgggaatcaagataaatatgaaactcgattgttggaagggccagaaaaacagaaagtg
aggctaatctccatcccaaggttctctgagagtggagttgctgttatgctcaatctgagg
aacttggaatgcagcacattgagtttctctacaagctttgatgcctga
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