Sorghum bicolor (sorghum): 8061639
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Entry
8061639 CDS
T01086
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8061639
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
8061639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
NACHT
AAA_16
AAA_25
AAA_27
ABC_tran
Motif
Other DBs
NCBI-GeneID:
8061639
NCBI-ProteinID:
XP_002438893
UniProt:
C5Z8A4
LinkDB
All DBs
Position
10:complement(57847054..57859463)
Genome browser
AA seq
1057 aa
AA seq
DB search
MAAPRAAKRPKFASGEAPPQRGEDDYVPGNIVEIELFNFMTYDHLVCCPGPRLNLVVGPN
GSGKSSLVCAIALGLAGDPNILGRASSVGAFVKRGEVAGHVKISLRGETPDDKICVTRKI
DTKNKSEWLLNGATVPKKEVIDVIKKFNIQVNNLTQFLPQDRVSEFAKLSPIQLLDETEK
AVGDPDLPVQHRQLVERSKELKALEVAITQKEKTLNNLKALNAEQEKDVERVRLRDNLLR
KAQLMKKKLPWLKFDMMRKEFVEVIQEKENTAKQEMEEAARVWEDSKGPIDKLKKHKATH
TSNIKKISSQINENMDKRQKVMDHDLRLNAELKATFDEIDDLKKQEKSRQQRILKTKEDL
AAAEKDLEDLQPYELPKAEMTQLRDQIARINVEIKNLKAERDAMESQLAREEESMRRCSD
RLKEMESKNSKLLQALRSAGADKIIEAYHWVQANKKNFREEVYGPVLLEVNVQDKLHATY
LEDHVPNYIWKSFITLDASDRDYIVRETKQYGIPVLNYLVREGTKRRPLNITPEMRQLGI
YSRLDQVFQAPDTVKDVLISQAGLDDSYIGTDETHRRADEVSKLGICDFWTPDNHYRWSK
SRYSGYMSAFVDAVRPSRLFKSNLDVSCIEELQLQKENHVKNIEGMREALKTLHRKQRQL
EDEEAIIHKQKEEIINAMKYHKKTREEIQRRVDMKRQMLRNISREEDVESSTRKLVDQVA
KLNDERFHAMIKLKDLLTEAVALKWSHTEKNMASIELDTKIWEMEKDVKKLEKDASQKAR
NYEDCKRITQEHRRRLSIAKQNAESIAVITKDLKKDFEAMPKTVEELEAAIQDTELEANS
MLFLNQNVLQEYQNRQHEIESISNKLKDDKGEHEICCSEIETVKGKWLPTLRTLVSKIND
TFSHNFQEMAVAGEVSLDEHGLDFDHYGILIKVKFRQTSQLQVLSSHHQSGGERSVSTIL
YLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQINTPQCFLLTPKLLPDLEY
SDACTVLNIMNGPWIEEPAKAWSSGDCWRTVVSASGH
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccgcgcgccgccaagcgccccaagttcgcctccggcgaggcgccgccccag
cgaggggaggacgactacgtgccggggaacatcgtggagatcgagctcttcaacttcatg
acctacgaccacctcgtctgctgccccggcccgcgtctcaacctcgtcgtcggtcccaat
gggtccggcaagagctcgctcgtctgcgccattgccctcggcctcgctggagaccccaac
attctcgggagggcgtccagcgtcggtgcattcgtcaagagaggtgaggttgccgggcac
gtcaagatatcccttcgcggggaaacacctgacgacaagatctgcgttactaggaagatt
gatacgaagaacaagtccgagtggctcctcaatggcgcgactgtccctaaaaaggaagtt
attgatgtgattaagaaattcaatattcaagttaacaacttaactcagttcttgccacaa
gaccgggtatctgagtttgcaaagctaagtcccattcaacttctagatgagactgaaaag
gctgttggtgatcctgatttacctgttcagcatcgtcaacttgtagagagaagtaaggaa
ctgaaagcgcttgaagtggctataacgcaaaaagaaaagactttgaataatctaaaggcc
ctcaatgccgaacaagaaaaagatgttgaacgtgttcgactaagagataatctccttaga
aaggctcaattaatgaaaaagaagctgccatggctgaaatttgacatgatgaggaaggag
tttgtagaggtcatacaagagaaggagaacactgcaaagcaagaaatggaagaagcagcc
agagtctgggaagattcaaaaggccctattgacaaactcaagaaacacaaggcaactcat
acttcaaatataaagaagataagcagccaaataaatgaaaacatggacaaacgtcagaaa
gttatggaccatgatttaaggctgaatgcagaactgaaagctacatttgatgaaattgat
gacctcaaaaaacaagaaaaatctcgccagcaaaggatcctgaaaactaaggaagatctc
gctgctgctgaaaaggatcttgaagatctacagccgtatgaacttcctaaagctgaaatg
acacagctaagagaccaaattgcacgaataaatgttgagataaaaaatctaaaagcggaa
agggatgccatggagtctcagttagctcgagaggaagaaagcatgaggagatgttctgat
aggctgaaggaaatggaaagcaagaacagtaaactactccaagcattacgaagtgctggt
gctgataaaatcattgaagcataccactgggttcaagctaacaaaaagaatttcagggaa
gaagtctacgggcctgttctccttgaggtaaatgttcaggataaacttcacgccacttac
ttggaagaccatgttccaaactatatatggaagtcattcatcactctggatgcttccgac
cgtgactacattgttagagaaacgaagcagtatggcatccctgttctgaactacttggtg
cgtgaaggcacaaagagacggccattaaacatcactccagagatgaggcaacttgggatc
tactcccgtcttgatcaagtatttcaagcccctgacactgtaaaagatgttttgattagt
caggcgggtttggatgattcgtacattggtacagatgaaactcatcgcagagcagatgag
gtatcaaagctaggcatctgtgacttttggactccggataaccattatcgatggtcaaaa
tcaagatatagcggttatatgtcagcatttgtagatgcagtccgtccttctcggctcttc
aagagcaatctggatgtaagctgcattgaagagcttcaacttcagaaagaaaaccatgta
aagaatattgaaggaatgcgtgaggctttaaaaacacttcatagaaaacagaggcagtta
gaagacgaagaggcaattatacacaagcagaaggaagaaattattaatgctatgaagtac
cataagaagactcgggaagagatacaaaggcgtgttgacatgaaaaggcaaatgctgagg
aacatatccagagaagaagatgtagaatccagcacaagaaagcttgttgatcaggttgct
aagttaaatgatgagaggtttcatgcaatgataaaacttaaggatttgcttactgaagct
gttgctctcaaatggagtcacacagaaaagaacatggcttcaattgagctcgatacaaag
atatgggagatggaaaaggatgtgaaaaaacttgaaaaggacgctagtcagaaggctaga
aactacgaagattgtaaaagaatcactcaggagcataggcggaggctgtctattgcgaaa
cagaatgcagagtcgatagccgtgattactaaagaccttaaaaaagattttgaagcgatg
cccaaaactgtagaagaactggaagctgcaatacaagatactgaattagaggcaaattct
atgctatttcttaaccaaaatgttttgcaggagtatcaaaaccggcaacatgagatagaa
tcaatctcaaataaacttaaggatgataagggtgaacatgagatatgctgttctgaaatc
gaaacagtaaagggtaaatggctcccaactctgcggactcttgtttcaaaaataaatgac
acattcagtcataactttcaagaaatggcagttgctggagaagtttcactggatgagcac
ggtcttgattttgatcactatggtattcttataaaggtgaaatttaggcaaactagtcag
ctgcaggtgttaagctctcatcaccaatctggaggggagcgatcagtatcgaccatcttg
tatcttgtgtcacttcaagatcttaccaactgcccctttcgggttgttgatgagataaat
caaggaatggaccccataaacgagaggaaaatgtttcagcagcttgttagagctgccagc
caaattaacacgccacagtgcttccttctgacgcccaagcttctacctgatctggagtac
agcgatgcctgcaccgttctcaacattatgaacggcccatggattgaggagccagcaaaa
gcttggagctccggggattgttggaggacagtggtcagcgcttctgggcactga
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