Sorghum bicolor (sorghum): 8061747
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Entry
8061747 CDS
T01086
Name
(RefSeq) coronatine-insensitive protein homolog 1b
KO
K13463
coronatine-insensitive protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8061747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8061747
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
8061747
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_At1g61320_AtMIF1
LRR_14
F-box
Motif
Other DBs
NCBI-GeneID:
8061747
NCBI-ProteinID:
XP_002439888
UniProt:
C5YYV2
A0A921QA22
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Position
9:51480201..51483687
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AA seq
599 aa
AA seq
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MGGEAPEPRRLTRALSIGGGDGGWVPEEMLHLVMGFVEDPRDREAASLVCRRWHRVDALS
RKHVTVPFCYAVSPARLLARFPRLESLAIKGKPRAAMYGLIPDDWGAYARPWVAELAAPL
ECLKALHLRRMVVTDDDLAELVRARGHMLQELKLDKCTGFSTDGLRLVARSCRSLRTLFL
EECQINDKGSEWIHDLADGCPVLTTLNFHMTELQVMPADLEFLARSCKSLISLKISDCDV
SDLIGFFQFATALEEFAGGTFNEQGELTMYGNVRFPSRLCSLGLTFMGTNEMPIIFPFSA
ILKKLDLQYTVLTTEDHCQLIAKCPNLLVLAVRNVIGDRGLGVVADTCKKLQRLRIERGD
DEGGVQEEQGGVSQVGLTAIAVGCRELEYIAAYVSDITNGALESIGTFCKKLYDFRLVLL
DREERITELPLDNGVRALLRGCTKLRRFALYLRPGGLSDAGLGYIGQCSGNIQYMLLGNV
GETDDGLFSFALGCVNLRKLELRSCCFSERALALAILRMPSLRYVWVQGYKASQTGRDLM
LMARPFWNIEFTPPSSENAGRLMEDGEPCVDSHAQILAYHSLAGKRLDCPQSVVPLYPA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtgaggcgccggagccccggcggctgacccgcgcgctgagcatcggcggcggc
gacggcggctgggtccccgaggagatgctgcacctggtgatggggttcgtcgaggacccg
cgcgaccgggaggccgcgtcgctggtgtgccgccggtggcaccgcgtcgacgcgctgtcg
cggaagcacgtcacggtgcccttctgctacgccgtgtccccggcgcgcctgctcgcgcgg
ttcccgcggctcgagtcgctggccatcaaggggaagccccgcgcggccatgtacggcctc
ataccggacgactggggcgcctacgcccgcccctgggtcgccgagctcgccgcgccgctc
gagtgcctcaaggcgctccacctccgacgcatggtcgtcacggacgacgacctcgccgag
ctcgtccgtgccaggggacacatgctgcaggagctcaagctcgacaagtgcaccggcttc
tccacggatggactccgcctcgttgcgcgctcctgcagatcactgagaactttgtttctg
gaagaatgtcaaattaatgataaaggcagtgaatggatccacgatcttgcagacggttgt
cctgttctgacaacattgaatttccacatgactgagcttcaagtgatgccagctgaccta
gagtttcttgcaaggagctgcaagtcactgatttccttgaagattagcgactgtgatgtt
tcagatttgatagggttcttccaatttgccacagcactggaagaatttgctggagggaca
ttcaatgagcaaggggaactcaccatgtatgggaatgtcagatttccatcaagactatgc
tccttgggacttactttcatgggaacaaatgaaatgcctattatatttcctttttctgca
atactgaagaagctggatttgcagtacactgtcctcaccactgaagaccattgccagctt
attgcaaaatgtccgaacttactagttctcgcggtgaggaatgtgattggagatagagga
ttaggagttgttgcagatacatgcaagaagctccaaaggctcagaattgagcgaggagac
gatgaaggaggtgtgcaagaagagcagggaggggtctctcaagtgggcttgacggctata
gccgtcggttgccgtgaactggaatacatagctgcctatgtgtctgatataaccaatggg
gccctggaatctatcgggacattctgcaaaaaactctatgacttccggcttgttctgctt
gatagagaagagaggataacagaattgccactggacaatggtgtccgagctttgttgagg
ggctgcaccaaacttcggaggtttgctctgtacttgagaccaggagggctctcagatgca
ggtctcggctacattggacagtgcagtggaaacatccaatacatgcttctcggtaatgtt
ggggaaactgatgatggattgttcagtttcgcattgggatgcgtaaacctgcggaagctt
gaactcaggagttgttgcttcagcgagcgagctctggccctcgccatactacgcatgcct
tccctgaggtacgtatgggttcagggctacaaagcgtctcaaaccggccgagacctcatg
ctcatggcgaggcccttctggaacatagagtttacacctcccagttccgagaacgcaggt
cggttgatggaagatggggaaccttgtgtagatagtcatgctcagatactcgcataccac
tccctcgccggtaagaggttggactgcccacaatccgtggtccctttgtatcctgcctga
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