Sorghum bicolor (sorghum): 8061800
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Entry
8061800 CDS
T01086
Name
(RefSeq) translation initiation factor IF-2, chloroplastic
KO
K02519
translation initiation factor IF-2
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sbi03012
]
8061800
03029 Mitochondrial biogenesis [BR:
sbi03029
]
8061800
Translation factors [BR:
sbi03012
]
Eukaryotic type
Initiation factors
MTIFs
8061800
Prokaryotic type
8061800
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
8061800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
IF2_N
Ras
GTP_EFTU_D2
RsgA_GTPase
Rv3651-like_N
Roc
Arf
Motif
Other DBs
NCBI-GeneID:
8061800
NCBI-ProteinID:
XP_021302897
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Position
9:complement(52589364..52595575)
Genome browser
AA seq
975 aa
AA seq
DB search
MASPASVTNLGSNGRSGPLPAASAARRAHLVTRISFTGFDGIRRWQYEPGRLCRCMVITN
LIEEKGVQFSSRGSVSVKADDDNDLLLKPPQKPVPPQKPVQLNGPPESMRTASLPDQKSA
GATLDDREKVRESLDAVLEKAEKLEASSFGSADGGNLSSRQNNVPNNGPGPTLVEEGGNS
RKTKTLKSVWRKGNPVPTVRKVIREQPRTESRSQSIPVAKPSVSSPSKPAPPLLSKPSVA
PPPRRPVKSDTSKEKKGPILIDKFASKRAAVDPIVPEELLDPLKPVRGPPAKVRVDRRKK
PDTQAGSRRRMPNDDGLVDEDTADVPISGVAVRKGRRWSKAKRRAARLSAMQAEEPVRVE
ILEVGEEGMLIEDLAYDLAVSESEILRFLSVRGVMLDNVQTLDKDLVKMVCMEYDVEVLE
SGPVKVEEMAKKKEFLDEEDLDKLEVRPPIVTIMGHVDHGKTTLLDYIRKSKVVASEAGG
ITQGIGAYQVLVPVDGNPQACIFLDTPGHEAFGAMRARGARVTDICIVVVAADDGVLPQT
SEAIAHARAAGVPIIIAINKIDKEGANAERVMQELSQIGLMPEMWGGDTPMIQISALTGD
NVDELLETVMLVAELQELKANPHRNAKGTVIEACLDKAKGPLATLVVQNGTLNKADIIVC
GEAYGKIRALYDDRGKLVDKAGPSNAVQVIGLNNVPLAGDEFEVVDNLDVARERANERAE
ALRLERISAKAGEGKVTLSSIAASVSSAKQTGIDTHELNVILKVDFQGTIEAIRQAIQAL
PQENVSLRFLLQAPGDVSVSDVDLAVASEGIIFGFNVRAPGSVKNYAKKKSVEIRLYKVI
YDLIDDLRNAMEGLLEPAEEEVPIGSAKVRAVFSSGSGKVAGCMITTGKVVQDCNVRVLR
KGKEVYVGSLDSLRRVKEAVKEVGAGLECGIGVDDFDEWQEGDIVEAFNTVKKARTLEEA
SATVTAALKDAGVQL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcctgcttctgtcaccaacctcggaagcaatgggaggtctggcccactcccg
gctgcttctgctgcaaggagggcgcacttggtcacaagaatcagcttcacggggttcgac
ggcataaggcggtggcagtatgagcctgggaggctttgcaggtgtatggtcatcactaat
ctgattgaggagaagggtgttcagttctcgtcaagagggagtgtcagtgtgaaggctgat
gacgacaatgatctccttctgaagccgccacagaagccagtaccaccacagaagccagtc
cagctaaatggaccaccggagagcatgagaacagcatcactgcctgatcagaagtcagca
ggagcaactttagatgacagagagaaggtcagggagtcattggacgctgtattggagaag
gcggagaagcttgaggcctcgagctttggtagtgcagatggtggcaaccttagttcaagg
cagaataatgttccgaataacggtccaggaccaacattagtggaggaaggtgggaattcg
aggaagacaaaaacactgaagagtgtatggcggaaggggaaccctgtgccaactgtacgt
aaggtcattagagagcaaccacgaactgaaagtaggagtcagtctatacctgtagctaaa
ccttcagtgtcatctccatcgaaacctgcccctccgctactatctaaaccttctgtagca
ccgcctcctcgtcggcctgtcaagtccgatacatcaaaggagaaaaaaggacccatcctt
attgataaatttgcttccaagagggcagcagttgatccgattgtacctgaggaattgtta
gatcctctaaaaccagtgcgaggcccaccagcaaaagtcagagttgatcgtcgcaaaaaa
ccagacacacaagctggttcccggcgacgtatgcccaatgatgatggattagttgatgag
gatactgctgatgtgccaatttctggtgttgcagtgcgcaagggtaggaggtggagcaag
gcaaaacgccgggctgcaaggctctcggctatgcaagctgaagagccagtcagagttgag
atccttgaagttggtgaagaaggtatgctgattgaggacttggcatatgacttggcagtt
agtgaatcagaaattttacgattcttatcggtgagaggagttatgcttgacaatgttcag
actctggataaagatttggttaagatggtttgcatggaatatgatgttgaagtactagaa
agtggtcctgtgaaagtggaggaaatggcgaagaagaaggagttccttgatgaggaagat
ttggataaattggaagtgagacctcccattgtgactatcatgggacatgttgatcatggg
aagacaactctgttggattatatacgcaagagcaaggtggtagcatctgaagctggtggt
atcacacaagggattggagcatatcaggttcttgtaccagtagatggaaaccctcaagcc
tgtatttttctggatactccaggacatgaggcatttggtgcaatgagagccagaggagct
agagtaactgatatctgtattgttgttgttgctgcggatgatggtgttctgccacaaaca
agtgaggcaattgcacatgcaagggccgccggagtgccaattataatagcaataaacaag
atagacaaggagggagctaatgcagaacgagttatgcaagagctttcccaaattgggctc
atgccagaaatgtggggtggtgacaccccaatgattcagataagtgctcttactggggac
aatgttgatgaacttctagagactgtcatgcttgttgcagagttgcaagaattaaaggcc
aatccacatagaaatgcgaagggcactgttattgaagcatgccttgacaaggccaaaggg
cctcttgctaccttagttgttcagaatggaaccctaaacaaagctgatattattgtgtgt
ggtgaagcttatggaaagatccgtgcattgtatgatgatcgtgggaagctcgttgacaaa
gcaggaccatccaatgccgtgcaggttattggcctcaataatgttccccttgctggtgat
gaatttgaggttgttgacaaccttgatgttgcacgtgaaagggcgaatgagcgtgctgaa
gcactgcggctagaaaggatatctgcaaaagctggggaaggaaaagtcacgctttcatct
attgcagcatcggtttcatctgcgaagcaaactggaattgatacacatgagctaaatgtt
atccttaaagttgattttcagggtacaatcgaggccattaggcaagccatccaagctcta
ccacaagaaaatgtctctctgaggttcctccttcaagctccaggagatgtgagtgttagc
gatgttgatctggctgttgcttcagaaggaattatatttggctttaatgtcagagcacca
ggatcagttaaaaactatgctaagaagaaaagtgttgaaattcgtctgtacaaagtgatc
tacgatttgattgatgatttacggaatgccatggaaggtcttcttgaacctgctgaggag
gaagtaccaattggttctgcaaaagttcgagctgtttttagtagtggcagtggaaaggtg
gcaggctgcatgattactacaggaaaagttgttcaagattgtaatgttcgggttcttcgc
aaagggaaagaagtatatgtgggttcgcttgattccttgagaagggtgaaagaagctgta
aaggaggttggtgctgggctagagtgtggtattggggtagatgacttcgatgaatggcag
gaaggtgacatcgtagaggcattcaatactgtgaagaaggcaagaacactcgaggaggcc
tctgcaaccgtgactgccgcgctcaaggatgcaggtgtccagctgtag
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