Sorghum bicolor (sorghum): 8061883
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Entry
8061883 CDS
T01086
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbi03036
]
8061883
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbi04812
]
8061883
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
8061883
Cytoskeleton proteins [BR:
sbi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
8061883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT_EZ
HEAT
Vac14_Fab1_bd
TOR1L1_N
Adaptin_N
Sec7-like_HDS
PDS5
TTI1
INTS1_R4
UTP20
ParcG
HEAT_DAAF5
Tti2
TAF6_C
RIX1
RRN3
Dopey_N
MMS19_C
ARM_LIN
Motif
Other DBs
NCBI-GeneID:
8061883
NCBI-ProteinID:
XP_002448140
LinkDB
All DBs
Position
6:complement(50291139..50303026)
Genome browser
AA seq
1442 aa
AA seq
DB search
MEAALEAARAKDTKERLAGVERLHEALDATARRGLAAAEVTALVDTCMDLTRDANFRIAQ
GGLQALSAAAVVAGDHFKIHLNALVPAAVERLGDGKQPVRDAARQLLITLMEVSSPTIIV
ERAGSYAWTHRSWRVREEFVRTVATAVGLFASTEISLQRVLLSPVLQLMNDSNQSVRDAA
ISCIEEMYKHMGSQFHEELQRHNLPSYMLKEINSRLDKIEPKVRSSDTAMQYKAVESRSV
SANPKRGSPRTKSIPRESTLFGGDTDVTEKPVEPVKVHSEKELLREFEKIAATLVPEKDW
SLRIAAMQRIEALVYGGAIDYPSFLMLLKQLVPPLSTQLSDRRSSIVKQACHLLNILSKE
LLGDFEPCAEQFIPMLFKLVVITVLVIAESADTCIKTILRNCKVARILPRIVDTAKNDRS
AILRARCCEYALLVLEYWADAPEIQRSADLYEDMIKCCVADAMSEVRATARTCYRMFAKT
WPERSRRLFMSFDPAIQRIINDEDGGVHKRYASPSLRDRVVQPSRASSHSSSTHVPGYGT
SAIVAMDKSAAISSDSSFPSNNLRLSQSKTIGRSSERSLESVLSSSKEKVSAIESLLKGV
SMSGQNFTAARSTSLDLGVDPPSSRDPPVPLAAPASNVLSLQNSALLDSSLPTIPPSSRN
GGSRLLDTMTTHLPTKERSRSPYLSNMSSESMSGLSLPYSRRSSERLQEGGRMDESYDIR
SARRIPQMHFERNYADMSYRDSSHRDSHNNHVPNFQRPLLRKQVMSRASASGRHSFDDSH
VPSGDVSGYTDSLASLNDALSEGLSPSSDWVARVSAFEFIRNLLKQGQKGIQEITQNFEK
VMKLFFRHLDDPHHKVAQAAFSALAEIIPACKKPFESYVERILPYVFSRLIDPKELVKKP
CSVTLEIVGRTYAIDMLLPALVRSLDEQRSPKAKLAVLEFANKSFSKYTVDSDGYSNSGF
LKLWLSKLAPLVNEKNAKLKEASISGIISVYSHFDSTAVLNFILSLSVEDQNLLRRALKI
KTPRIEVDLVNYLQSKKERSRPKSYDQADFGTSSEDGYALTSKNSYPFGRFSSSSLDAEG
GKKINSMQEPVLHNVSIGRTASDMSMDHAIQSLESSTGAEVHLTRSREPKTNSNSVVEAA
RSWTNYPEKTDASLDGETATGTPRLDFSRFLTSDGHNTVGSTPEESVQEGDMIVNLSSIK
TSLQTDNGLSIPQLLHQISNDTEVSSSEKREALQQLVDASLDNNSSIWAKYFNQILTAVL
EVLDDSDSSTRELALSLIAEMLNNQKDSIEDSMEIVLEKLLHVTKDAVAKISNEANQCLN
VLLAKYDPFRCLAIIVPLLVSDDEKILVVCINCLTKLVGRLSQEELIDQLPTFLPALFDA
FNNQSPDVRKTVVFCLVDIYIMLGKAFAPYLEGLSSTQLRLVTIYANRISQARSGKPIDS
NQ
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgctggaggcggcgcgcgccaaggacaccaaggagcgcctggccggcgtc
gagcggctgcacgaggcgctcgacgccacggcgcgccgcgggctggcggcggccgaggtc
accgcgctggtcgacacctgcatggatctgacgcgcgacgccaacttccgcatcgcccag
ggcggcctccaggcgctctccgccgccgccgtcgtcgccggcgaccacttcaagatccac
ctcaacgccctcgtcccggccgccgtcgagcgcctcggcgacggcaagcagcccgtgcgc
gacgccgcgcgccagctcctcatcacgctaatggaggtttcttcaccaacaatcatagtt
gaaagagctggtagttatgcatggactcataggagttggagggtgcgggaagagtttgta
cgtacagtggcaactgcagttgggctatttgcttctacagagatttccttgcaacgagtt
ttgctttcacctgttctgcaattgatgaatgattcgaaccaaagtgtgcgagatgctgct
atctcttgtattgaggagatgtacaagcacatggggtcacaatttcatgaagagttgcag
cgccataatctgccttcctacatgctaaaagaaataaattcaaggttggataaaatagaa
ccaaaggttcgctcatctgatacagcgatgcagtataaggctgtagaatcaagatctgtt
agtgctaatccgaaaagaggcagcccaagaacaaaaagcataccaagggaaagtacactg
tttggaggtgacactgatgttacagaaaaacctgtggaaccagtaaaagttcattctgag
aaagaattacttcgggagtttgagaagatcgcggctacccttgttccagaaaaggattgg
tctttacgtattgctgccatgcaaaggattgaagccctggtttatggaggtgcgatcgat
tatccatcattccttatgctcttgaagcaactggttcctccattgtctactcagctgtct
gatcgacgttctagtattgtcaaacaggcatgccacctacttaatatactatccaaagaa
ctcctcggcgattttgagccatgtgctgaacaattcatcccgatgctttttaagcttgtt
gtcataacagtgcttgttatcgctgaatctgcagatacatgcataaaaactatcctgcgg
aattgcaaggttgctaggattcttcctcgcatagttgacacagcaaagaatgaccgaagt
gcaatcctccgtgcaaggtgctgtgagtatgcacttctggtactggagtattgggctgat
gccccagaaatacaacgttcagctgatttatatgaggatatgataaaatgctgtgtagca
gatgcgatgagcgaggttcgtgcaactgcaagaacttgctatagaatgtttgcaaagaca
tggcccgagcgctcacgccgtctttttatgtcatttgatcctgcgatacagaggataata
aatgatgaagatggtggtgtgcacaaaaggtatgcttctccctcattgcgtgatagggtt
gtgcagccttcacgtgcttcctctcattcaagtagtacacatgtacctggatatggcact
tcggctatcgttgcaatggacaagagtgcagctatttcttcagattcatcttttccatca
aacaatcttcggttatcacagtcaaagacgattggcagaagttctgagagaagcctggag
agtgtgcttagctccagcaaagaaaaagtttctgccattgaaagtttgctgaaaggtgtc
agcatgtcagggcaaaatttcactgcagcgcgctcaacaagcttagatcttggagttgat
cctccatcatctcgtgatcctcctgtgccgcttgcagcaccagcatcaaatgttctgtca
ttgcagaactcagcactgttggactcatcccttcctaccatcccacctagttcacgaaat
ggtggttcccgcttattggatacgatgacaacacacttgcctaccaaagaacggtcaagg
tcaccgtatttgagtaatatgtcatctgagtccatgtctggcttatcattgccttactca
agaagatcttcggagaggcttcaagaaggaggccgcatggatgagagctatgatatccgt
tcagctaggcgaatccctcaaatgcattttgagagaaactatgctgatatgtcttatagg
gattccagccacagagattcacataacaaccatgtcccaaatttccagagacctcttcta
aggaagcaagtaatgtcaagggcttctgcaagtggcagacacagctttgatgatagccat
gtaccatcaggtgatgtgtctggctatacagattctctggcttctctaaatgatgcactt
tctgagggtctcagccctagttctgactgggtagcaagagtttcagcttttgagtttatt
cggaatttattgaaacaaggccagaaaggcattcaagaaattactcaaaattttgagaag
gttatgaagctgtttttccgtcatttggatgatcctcaccataaggttgcacaggcagcc
ttctctgcacttgcagagattatcccagcctgcaagaagccatttgaaagttatgtcgag
cgaattctaccatatgtattttcgcggcttattgatccaaaagagttggtgaaaaaacca
tgctctgtaacattggagattgttggtcgaacatatgctattgatatgttgttacctgcg
ctagtacgatcattagatgaacagaggtccccaaaggcaaaattggctgttcttgagttt
gcaaataaatctttcagcaagtacactgttgactctgatggttatagtaacagtggcttc
cttaaactatggctttcaaaattggcacctttggtaaatgaaaagaatgcaaaattgaag
gaggcatctatttctggtatcatatctgtttattctcactttgattcaacagcagtgcta
aattttattctcagtttgtcagttgaagatcaaaacctcttgaggagagccctgaagatc
aaaacccctcgtattgaggttgatctggtgaactacttgcagagcaagaaagaacgttca
cgccccaaatcttatgaccaggcggattttggaacttcttcggaggatggctatgcactg
acatccaagaacagctatccatttgggcggttttcttctagttcccttgatgctgaaggg
ggaaagaagatcaattcaatgcaagaaccagtgctgcataatgtctctataggtcgaaca
gcttctgatatgagcatggatcatgctattcaaagtttagagtcatctacaggagctgaa
gttcatttaactaggagtagagaaccaaagactaacagtaactcagttgtggaagctgct
cgctcttggacaaactaccctgaaaaaactgatgcctccttagatggtgaaactgctacc
ggtactcctcggttagatttcagccggtttcttacttctgatgggcataatactgttggt
tcaacccccgaagaaagtgttcaagagggtgatatgattgtgaatcttagttctataaag
accagccttcaaacagataacggtctgagcataccacaacttctccatcagataagcaat
gacactgaagtttcaagctcggaaaagcgggaagcattgcaacagttggttgatgcttcc
cttgataataacagctccatctgggcaaagtacttcaatcaaatcttaacggctgtgctc
gaggtattagatgactctgattcatccacgagggagcttgctttatctttgattgctgag
atgctcaacaaccagaaagattcaattgaagactctatggagattgttcttgaaaaactc
ctgcatgtaaccaaagatgcagtggccaagatttcaaatgaggcaaaccaatgcttaaat
gttctattggcaaaatatgatcctttcagatgtcttgctattattgtacctttattggtc
agtgatgatgagaagatacttgtcgtgtgtatcaactgtttgacaaagcttgttgggcgc
ctttctcaagaggaattgattgatcagttgcctacatttctgccagcattatttgatgct
tttaacaaccaaagtccagatgtccgaaagactgttgtgttctgcctggtggatatctac
atcatgcttgggaaagcattcgctccatacttggaagggcttagcagcacgcagctccgc
ctagtaaccatctacgctaaccggatttcgcaggcgaggtccggcaagccaatcgattct
aaccaatga
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