Sorghum bicolor (sorghum): 8061909
Help
Entry
8061909 CDS
T01086
Name
(RefSeq) phospholipase D zeta 1 isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00564
Glycerophospholipid metabolism
sbi00565
Ether lipid metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
sbi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
8061909
00565 Ether lipid metabolism
8061909
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
8061909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8061909
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
8061909
Membrane trafficking [BR:
sbi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
8061909
Endosome - Golgi transport
Others
Others
8061909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
PH_9
PH_8
Motif
Other DBs
NCBI-GeneID:
8061909
NCBI-ProteinID:
XP_021303271
LinkDB
All DBs
Position
9:complement(44365761..44409665)
Genome browser
AA seq
1159 aa
AA seq
DB search
MNLERLPPPAGSRHGYHRYARMPPQADLEGEAAPADQEREPERRPEVLAASASASLRVPD
AARVFDELPRASIVAVSRPDAGDITPMLLSYTIEVHYKQFRWRLYKKASQVLYLHFALKR
REFLEEFHEKQEQVKEWLQNLGIGEHMPVVHDEDEADDVNVPPQSDDNSIKNRNVPSSAV
LPVIRPALGRQNSISDRAKVAMQEYLNHFLGNLDIVNSREVCKFLEVSCLSFLPEYGPKL
KEDNVSVGHLPKIQKDRKKRCCSCGLFNCCKSNWQKVWVVLKPGFLALLEDPFDPKLLDV
IIFDALPHMDISGEGQISLAKEIKERNPLHFGFQVSSGGRTIKLRTRSSSKVKDWVTAIN
AARQPPEGWCYPHRFGSFAPPRGLLEDGSMVQWFVDGQAAFKAIASSIEEAKSEIFITGW
WLCPELYLRRPFQHHGSSRLDALLEARAKQGVQIYILLYKEVALALKINSLYSKQRLLNI
HENVKVLRYPDHFSSGVYLWSHHEKIVIVDNQVCYIGGLDLCFGRYDSPEHKVADSPPVM
WPGKDYYNPRESEPNSWEDTMKDELDRAKYPRMPWHDVQCALYGPPCRDVARHFVQRWNY
AKRNKALNEQAIPLLMPHHHMVIPHYKGRSKEINDEAEGKQYHDKDVDIGKPVLTSRTSC
QDVPLLLPQELEPRELSSSDLRMTDLDINHSDRVSKKSFNQPLLNRKAKLDSSHQDLPMR
SFVDNLSSLEPSSIRRFDSSKDDRNHIDKKWWEMQERGNQVASVLDVGQVGPRATCRCQV
VRSVGQWSAGTTQIEGSIHNAYFSLIEKAEHFVYIENQFFISGLSGDDTIKNRVLEALYR
RILRAEREKKRFKAIIIIPLLPGFQGGIDDGGAASVRAIMHWQYRTICRGSNSILQNLFD
VIGPKAHDYISFYGLRAHGKLYDGGPLVTSQIYVHSKLMIVDDRITLIGSANINDRSLLG
SRDSEIAVVIEDKEVVNSKMDGRPWEAGKFSLSLRLSLWAEHLGLHPGEVSHIMDPIDDS
TFKNIWMATAKTNTMIYQDVFGCVPNDLIHSRYEFKPTLGLHFASSAVVSETYSPFRAQF
RQSFAHLRDKIGHTTIDLGVAQGKLEAYQDGDLKSTDPMDRLQLVRGHLVSFPLDFMCQE
DLRPYFSESEYYTSPQVFH
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggagcgcctaccgccgccggcgggatcgcgccatggttaccaccgctacgcg
cggatgccgccgcaggcggacctcgagggcgaagcggcgcccgcggaccaggagcgggag
cccgagcggcggccggaggtcctggcggcctcggcgtcggcatcgctccgggtgcccgac
gccgcgcgggtgttcgacgagttgcccagggcgtccatcgtcgccgtctcgcgccccgac
gccggggacatcacgcccatgctgctctcctataccatcgaggttcattacaagcagttt
aggtggcgtctatataagaaagcttcgcaggttctctatcttcactttgcattgaagagg
cgtgaattccttgaagaattccatgaaaagcaggagcaggtcaaagaatggctccaaaat
ctgggaattggggagcatatgccagtagtacatgatgaggatgaagcagatgatgtgaat
gttccaccacagtctgatgataactccattaaaaatagaaacgttccttcaagtgctgtt
ttacctgtcattcgaccagctcttggacgtcaaaactctatttccgatcgagcaaaagtt
gcaatgcaagaatatctaaaccatttcttagggaacctggatatcgtcaattcacgggag
gtttgcaaatttttggaggtgtcatgtttgtcatttttacctgagtatggtcccaagtta
aaagaagacaatgtttcagttggacatttaccaaagattcagaaggaccggaaaaaacga
tgctgttcatgtggattgtttaactgttgcaagagcaattggcaaaaggtctgggttgtc
ctgaagccaggattcttggctttacttgaagacccttttgatccaaagctgttagatgtc
attatttttgatgcattgccgcacatggatataagtggagaaggccaaatttctttagca
aaagagattaaagaacgtaacccactgcattttggattccaggtttcttctggtggccgg
acaataaagctacgcacaagaagctcttctaaggttaaggactgggttactgcaataaac
gctgctcgacaacctccagaaggctggtgttatcctcatcgttttggctcatttgcacca
ccgaggggtttgttggaagatgggagtatggtacaatggtttgtagatgggcaagctgca
ttcaaagctattgcatcctccattgaggaagccaaatcggagatatttattactggctgg
tggctctgcccagagttgtatcttcgacgtccattccaacatcatggatcatctaggctt
gatgctctactggaagcaagagctaagcagggtgtacagatttacattctcttgtacaag
gaagttgctcttgcattgaaaattaacagcttatacagtaaacaaaggcttcttaacatt
catgaaaatgttaaagttctgcgttatcctgatcatttctcaagtggtgtatacttgtgg
tcacaccatgagaagattgtgattgttgataatcaagtatgttatattggaggtcttgat
ctgtgctttggtcgctacgatagtcctgagcataaagtcgctgattctcctccagtgatg
tggccaggaaaggactactacaatcctagggaatctgaacccaattcttgggaggacacc
atgaaagatgagctggaccgtgctaaatatccccgcatgccttggcatgatgttcagtgt
gctctttatggtccaccttgccgtgatgtagcaaggcattttgttcagcgctggaattat
gcaaagaggaacaaagctctaaatgagcaagcaattcccttgctgatgcctcatcaccac
atggtaattccacactacaagggtagaagcaaagaaataaatgatgaggctgagggtaaa
caataccatgataaggatgttgatattggaaagccagtgttgacgtcacgcacatcatgt
caggatgttccattgctcttacctcaagagcttgaacctcgtgaattatccagttcagat
ttaaggatgactgatttagatattaaccattcagatcgtgtaagcaagaagagctttaat
cagcctttgctcaatcgaaaggcaaaattggattcttctcatcaggatttacctatgaga
agttttgtagacaatctcagttcccttgagccatcatctattagacgttttgattcgtcg
aaagatgataggaatcacatcgacaagaaatggtgggaaatgcaggagcgaggcaaccaa
gttgcttcagtacttgatgttggacaggttggtccaagggcaacatgtcgttgtcaggtt
gttaggagtgtcggtcaatggtcagctggaaccactcaaattgaaggaagcatccacaat
gcctacttttctctgattgaaaaggcagaacactttgtatacattgagaatcaatttttc
atatcgggtctgtcaggagatgacacgattaaaaaccgtgtactggaagcattgtatcgg
cgcatacttcgagctgagagagagaaaaaacgctttaaggccatcatcatcatacctctt
ttacctggttttcagggaggcattgatgatggtggagcagcatcggtgagggcaatcatg
cattggcaatatcggactatctgcagaggctctaattcgattcttcagaatctatttgat
gttattggacctaaagcacatgattacatctccttttatgggcttagagcacatggtaaa
ctctatgatgggggtcccttggttactagtcagatttatgtacatagcaagttaatgata
gttgatgaccgcatcacattgattggctcagctaacattaatgatagaagcttgcttgga
tcaagagattccgagattgctgtggtcatcgaagataaagaagttgttaattcaaaaatg
gatggaagaccctgggaagctgggaagttctctctaagcctacgtctctcactgtgggcg
gagcaccttggccttcatcctggagaggttagccatatcatggatcccatagatgattca
acgttcaaaaatatctggatggccactgccaagacaaataccatgatataccaagatgtc
tttgggtgtgtacccaacgatctcatccactcaaggtatgaatttaagcctacattgggg
ttgcattttgcgtcaagtgctgtggtttctgaaacatatagtccattcagggcccaattt
cggcaaagctttgctcacttgagggacaaaattggccacactacaattgatttgggtgtt
gcccaagggaagctagaagcttaccaagatggtgatctcaaaagtaccgaccctatggac
agactacagttagtcaggggccaccttgtttcttttcctttggatttcatgtgccaagag
gacttgagaccatatttcagcgaaagtgagtactacacatcaccacaggttttccattag
DBGET
integrated database retrieval system
