Sorghum bicolor (sorghum): 8061986
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Entry
8061986 CDS
T01086
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8061986
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
8061986
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8061986
03036 Chromosome and associated proteins [BR:
sbi03036
]
8061986
Protein phosphatases and associated proteins [BR:
sbi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
8061986
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
8061986
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
8061986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
8061986
NCBI-ProteinID:
XP_021305132
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All DBs
Position
10:50073008..50084547
Genome browser
AA seq
512 aa
AA seq
DB search
MDPPGPGDEGEAAQPQPLEWRFAQVFGERAAGEDVQEVDIISAIEFDKSGDHLATGDKGG
RVVLFERTDARDQNAIRRELERQDVPVTRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IKWCQTANSALSLLSTNDKTIKYWKVQEKKVKRVAVMNLDSSQSIGSSTTAIASTSSSKA
PLPNGGCSDKFDCLNNGLSFPPGGYPSLRLPVVTSLEANPVARCRRVFAHAHDYHINSIS
NNSDGETFISADDLRINLWNLEINSQSFNIVDVKPTNMEDLTEVITCAEFHPSHCNTLAY
SSSKGSIRLIDLRQSALCDNHSKIFEEHEAPGSRSFFTEIIASISDIKFSRNGRYILSRD
YMTLKLWDLNMNSGPVSTFQVHEHLRPRLCDLYENDSIFDKFECCLSGDGLRVATGSYGN
IFRVFGCTSGSMEATTLEASRNPMRRQIANPVRPTRTLTSFTRGVRRGGENQGVDANGNS
FDFSTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggatcccccaggccccggcgacgaaggcgaggcggcgcagccgcagccgctggagtgg
cggttcgcccaggtcttcggcgagcgtgccgcgggcgaggacgtccaggaagttgacatc
atctctgcaattgaatttgataaatctggtgatcatcttgccactggggataaaggagga
cgcgtggttttatttgaaaggacagatgctcgggatcagaatgccatccggagagaactg
gagagacaagatgttccagttactagacacccagaattccgctacaaaacagaatttcag
agtcatgaacctgagtttgactacctcaaaagtttggaaatagaggaaaagatcaacaag
atcaagtggtgccagacagccaacagtgctctctcccttttgtctacaaatgataaaaca
ataaaatactggaaggttcaagagaagaaagtaaaacgagttgcagtaatgaatttggac
agttcccaaagtataggaagtagtaccactgctattgcaagtaccagtagttctaaggca
cctcttccaaatggtggatgctctgataagtttgattgcctgaataatggtctctcattt
ccacctggaggctacccatcactgcgtttgccagtggttaccagtctagaagcaaaccct
gttgctagatgtcgacgtgtatttgctcacgcacacgattaccatataaattctatttca
aataatagtgatggtgagacattcatatcagcagatgatctccgaataaatttatggaac
ttggaaataaacagccagagctttaacattgttgatgtgaagcctacaaacatggaagat
ctaacagaggtgattacatgtgcggagttccatccatcccattgtaatacactggcctac
agtagttcaaagggttctatccgccttattgatctacgtcaatcagcactgtgtgacaac
cattccaaaatattcgaggaacatgaagcacctggatcaagatccttctttacagaaatt
attgcatcaatttctgatataaagttttcaaggaatggtagatatattcttagccgtgat
tatatgactctcaagctatgggatctaaacatgaattcaggccctgtttcaaccttccaa
gtccatgaacatttgagacctaggctctgcgatctgtatgagaatgactcaattttcgac
aagtttgagtgttgtcttagtggggatggacttcgtgttgcaactggttcttatggtaat
atatttcgcgtttttggttgtacttctggaagcatggaggcaacaactttggaagcaagt
aggaatccaatgaggcgtcagattgcgaatccagtaaggcccacacggacactaacttct
tttacccgtggtgttcggagaggtggagaaaatcaaggcgttgatgctaatgggaattca
tttgacttctcaacgaagctgctccacctcgcatggcacccgaccgagaattccattgca
tgtgctgctgcaaatagcttgtatatgtattatgcgtag
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